Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2511 ATGGTTGCCGCCAAGAAAACCAAGAAGACCCATGAGAGCATTAACAACAGGCTCGCTCTTGTCATGAAGAGTGGGAAGTATACTCTGGGTTACAAAACAGTGCTTAAATCCCTTAGGAACTCTAAAGGAAAACTGGTCATCATTGCCAACAATTGTCCACCTCTGAGAAAGTCAGAAATAGAGTACTATGCCATGTTGGCAAAAGTTGGAGTTCACCATTACAATGGAAGTGAGTTCTCAATTGCAAAGTTTTTTAACTCGTAA 264 0.4091 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLVIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSEFSIAKFFNS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2511 87 FunFam 60S ribosomal protein L30 2 85 - -
Lele07g2511 87 SUPERFAMILY L30e-like 13 83 IPR029064 -
Lele07g2511 87 Gene3D - 1 86 IPR029064 -
Lele07g2511 87 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 13 77 IPR004038 -
Lele07g2511 87 ProSitePatterns Ribosomal protein L30e signature 1. 24 48 IPR022991 -
Lele07g2511 87 PANTHER RIBOSOMAL PROTEIN L30 1 80 IPR039109 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2511 Lele-ChrLele07 30565419 30566355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2511 1 75 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 86.667 3.78e-45 139