Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2501 ATGAGCTGTAACGGATGCCGAGTTTTGAGAAAAGGTTGCAGTGAGAATTGCAGTATAAAGCCGTGTTTGCAGTGGATTAAAAGCACTGAGTCTCAGGCAAATGCTACTGTGTTTCTCGCCAAGTTCTACGGCCGAGCTGGGCTCATGAACCTCATCAACGCCGGTCCTGAACACCTTCGTCCTGCGATTTTTCGGTCTTTGCTATATGAGGCGTGCGGGCGGATAGTTAACCCGATTTATGGATCCGTCGGTTTGTTATGGTCCGGGAGTTGGCAGCTCTGTCAGGCCGCCGTGGAAGCCGTCTTGAATGGCGCTCCGATCACGCCGATCACCTCCGAGGCGGCCTCCAACGGAAGGGGCCCACCTCTCAAGGCTTACGACATACGCCACGTGTCCAGGGACGAGAACTTGGCCACGTCAAACGATGCTCAACGAGTCGTCAAGACTCGCACGAGGTTCAAGCGCTCCGTCGGCGGTGGCGTCAAGCCGAAATCTAACCACAACAAACCAGCGAACGGCTCGTTATCCATTGAGCCCGCTCCAGAATTTAACGCTCCGATCAATTCCTGGACCGGATGTTGTCCTGCTAAACCGGTTGTGAACCAGTCGGGGAGTCACGAGTCATCGCTGAGCCACCAATCGGAGGCGGTGAACGAGAGCAAAGAGAGAGAGAGCGAGAGCATGATCTCCGTGGAGACCGCCGAGACTTCGATCCTCTTCCGAGATGAACCGGAATCCACCGGGAAGGCCAGTGAGCGTACCGTCGATGAAACAACCGATATAGGCCTAGAGTTGACCCTAGGGTTCGAACCAGCGTCACGTGCGAACCACGTGGTACCAGTGAAGAAGAGGAAGATCTAG 861 0.5517 MSCNGCRVLRKGCSENCSIKPCLQWIKSTESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLNGAPITPITSEAASNGRGPPLKAYDIRHVSRDENLATSNDAQRVVKTRTRFKRSVGGGVKPKSNHNKPANGSLSIEPAPEFNAPINSWTGCCPAKPVVNQSGSHESSLSHQSEAVNESKERESESMISVETAETSILFRDEPESTGKASERTVDETTDIGLELTLGFEPASRANHVVPVKKRKI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2501 286 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lele07g2501 286 PIRSF AS2 1 286 IPR017414 -
Lele07g2501 286 MobiDBLite consensus disorder prediction 201 215 - -
Lele07g2501 286 MobiDBLite consensus disorder prediction 201 256 - -
Lele07g2501 286 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Lele07g2501 286 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 267 - -
Lele07g2501 286 MobiDBLite consensus disorder prediction 151 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2501 Lele-ChrLele07 30454650 30455629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2501 1 286 AS2 family AT3G02550 54.296 1.16e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele07g2501 LOB 4.1e-24 No_clan