Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2497 ATGGCAGATATCGATTACCATAGTAAAAAACCAATCGATACTACAACTCCGACGACGACGTCTCTGAAGCTCTTTGGCATTAACATTCACAAAGTTTCAGATTCCGATGGGGCCTTGAACACCGGTAACGATCACAGGAAATACGAGTGCCAGTATTGCTGTCGTGAGTTTGCCAATTTACAAGCTTTGGGAGGCCATCAAAACGCACACAAGAAAGAAAGACAGCTTCTAAAGCGAGCTCAGATGCAAGCAGCTCGTGCTGCTTTTGTTGCTTCACATCATAGTTATATTCATCATCATAACCCTATCATATTATCTCCACCTGAGATCCTCACCGGATCGCGGCCTCCGCCACTACCACCACCGCGTTCTCCGTGGCCACACATTGTGTCAACTAATCCACAATCTTCGGTGTACCATTCTGGGGCATTTGGTTTGTGTGTGAATTCTGGTTTTGCAGGTTTGCATGATCCTTCACCACCCTCATCTATGGCGACATACGGTGGCTTTACCGGCAGCGATGGTGGTGAACGAGGCTTCAGTTTGGATTTGCAACTCAGTCTGAATGTCTTTTGGGAATTGATGTAA 588 0.4643 MADIDYHSKKPIDTTTPTTTSLKLFGINIHKVSDSDGALNTGNDHRKYECQYCCREFANLQALGGHQNAHKKERQLLKRAQMQAARAAFVASHHSYIHHHNPIILSPPEILTGSRPPPLPPPRSPWPHIVSTNPQSSVYHSGAFGLCVNSGFAGLHDPSPPSSMATYGGFTGSDGGERGFSLDLQLSLNVFWELM 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2497 195 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Lele07g2497 195 SUPERFAMILY beta-beta-alpha zinc fingers 45 75 IPR036236 -
Lele07g2497 195 PANTHER ZINC FINGER PROTEIN 5 1 189 IPR044299 GO:0010090
Lele07g2497 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Lele07g2497 195 Pfam C2H2-type zinc finger 48 73 - -
Lele07g2497 195 Gene3D Classic Zinc Finger 34 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2497 Lele-ChrLele07 30394056 30394805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2497 19 118 C2H2 Transcription Factor Family AT1G67030 54.545 1.76e-30 108