Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2464 ATGGATGGGGAAAATAGATTATCTCCCAATAAATTGGTACAGTGTCGTATATGTCATGATGAGGATGAAGACTCAAACATGGAGACTCCCTGTTCTTGTAGTGGCAGTTTGAAGTATGCGCATCGAAAATGTGTTCAAAGATGGTGCAATGAGAAAGGTGATACTATCTGTGAGATTTGCCAACAGCAATTCAAGCATGGTTATACAGCGCCGCCTCCATTATTCCATTATGGCAGTTCCCCATTGAATTTTAGAGGTAACTGGGAGATATCCAGAAGGGATCTGCAAAATCATCAGTTCATAGAAATGTTTGCTGCTAATCGTGAATTCTCAGACACTGATGAGGAATACTCAGTCCCCTCAACAGGGAGTCTGGTCTGCTTTCGCATGGTTGCAATTATTTTTATCGCTCTTCTCGTTTTACGCCATACCCTTCCAATTATAGTCAGTGGAGCGGGGGAATACTCATTGACTCTTTATATGTTATTAGTCATGAGAACAATCGCAATACTTTTACCTGTATGTATAATGGTTAAGGCATTTACCATTATCCAACGGCGACGATACCAGGATCATTACTCCTCTATTCTGCAACATGAAGAGAGTGACTTGGAACAGCCTCAGTCTCGTGTCATTCATATCTTAAGATATTTTGTAGTGGAATCTTGTATTGATCAAAATAATCTTGAGGTTATGAAAAGCATATCTAATTCTGGAAATTGTATAACATCACGAGTTCGCGACAAGCCGATTTAA 756 0.3968 MDGENRLSPNKLVQCRICHDEDEDSNMETPCSCSGSLKYAHRKCVQRWCNEKGDTICEICQQQFKHGYTAPPPLFHYGSSPLNFRGNWEISRRDLQNHQFIEMFAANREFSDTDEEYSVPSTGSLVCFRMVAIIFIALLVLRHTLPIIVSGAGEYSLTLYMLLVMRTIAILLPVCIMVKAFTIIQRRRYQDHYSSILQHEESDLEQPQSRVIHILRYFVVESCIDQNNLEVMKSISNSGNCITSRVRDKPI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2464 251 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 6 190 IPR033275 -
Lele07g2464 251 FunFam Zinc finger family protein 3 70 - -
Lele07g2464 251 Pfam RING-variant domain 15 60 IPR011016 GO:0008270
Lele07g2464 251 Pfam Protein of unknown function (DUF3675) 67 180 IPR022143 -
Lele07g2464 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 70 IPR013083 -
Lele07g2464 251 SMART ringv_2 14 61 IPR011016 GO:0008270
Lele07g2464 251 SUPERFAMILY RING/U-box 12 65 - -
Lele07g2464 251 CDD RING_CH-C4HC3_MARCH 15 61 - -
Lele07g2464 251 ProSiteProfiles Zinc finger RING-CH-type profile. 7 67 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2464 Lele-ChrLele07 30021408 30025079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2464 2 61 C3H Transcription Factor Family AT2G37950 44.444 4.26e-08 50.4