Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2453 ATGCTTAGCCTGTACATTGAAATGAGAAAGCACAATGCTACGTACATTCACTTTGAGTTGTTAAATTTCATCTATGTGGTACCAGTAGTAATTAGCTTAAGAATAGTACAAGAAGGCCGCGTCACTCCTCTGACAACAATTTTGGGAATGAATAAAAAATTTGGAGGTGGAATTAAGCCAACAGGGACGCCATCCATGGCTTGGTCCTCTGTTGTTGTTGTCTTCTCTCTTCTTGCTGGTGCCTCTATTGTCCATAATATCTATAAGCCTAATCTTACATTGCCTCCTGTTGATGGAGCTGATGAGACCAAACAGAAAGTTGATGAGAAAGAATAGCAAACACAAGATCTGGGACATGATATGGGAATGGAACATACAAGAGGATCAGAGTACTCGATACTAAGTGCTGTAGGAGAGATGGAGGTTATAGGGCTATTCTTGGGTATGGAGAAAACTCTTGTTGGGATATCTCAGCCCTTTAAGTGGGCCTCAATCAAGTCGGGTAGGATTAAATTCTGTATTTGGATATGGTTGTTGGATCTTGCGTCCCTTGTGATGCAAAACCTTATTAAATTCACAGAAAATATGGCTGTTGAAAATTTCCTGTTCAGTAAGTCTAAAATAACCCATTGCAATGTTCAGGCTGGATTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCTAGCATTGTAGGTCGTCCTCGTCACACTGGTGTGATGGTTGGCATGGGCCAAAAGGATGCATATGTTGGTGATGAGGCACAATCTAAGAGGGGTATTCTGACTCTCAAGTACCCAATTGAGCATGGAATCGTTAGCAACTGGGATGATATGGAAAAGATTTGGCATCATACCTTCTACAATGAGCTTCGTGTTGCCCCAGAAGAGCACCCAGTTCTTTTAACTGAGGCTCCACTTAATCCCAAGGCTAATCGTGAGAAGATGACTCAAATTATGTTTGAGACTTTTAACACCCCTGCTATGTATGTAGCCATTCAAGCTGTTCTTTCACTGTATGCTAGTGGTCGTACAACTGGTATTGTGTTGGACTCTGGTGATGGTGTAAGCCACACAGTTCCTATCTATGAGGGTTATGCTCTCCCTCATGCCATCCTTCGTCTAGACCTGGCTGGTCGTGACCTCACTGAATACATGATGAAAATTCTGACTGAACGTGGGTATTCTTTTACCACCTCAGCAGAGCGGGAAATTGTTAGAGATGTGAAGGAAAAGCTAGCTTACATTGCCCTTGACTATGAGCTAGAGCTAGAGACATCCAAGACCAGCTCTGCAGTGGAGAAGAGCTATGAGTTGCCTGATGGTCAGGTCATCACTATTGGTGCTGAACGTTTCAGATGTCCAGAGGTTTTGTACCAACCATCTTTGATTGGAATGGAAGCAGCAGGCATTCATGAGACAACATACAACTCCATTATGAAGTGTGATGTCGATATTAGGAAAGATTTGTATGGTAACATTGTCCTTTCAGGAGGTTCAACCATGTTCCCTGGCATTGCTGATAGAATGAGCAAGGAGATCTCTGCATTAGCCCCAAGTAGCATGAAGATCAAAGTGGTTGCACCACCTGAGAGAAAGTACAGTGTCTGGATTGGTGGTTCAATTTTGGCATCTCTGAGCACCTTCCAGCAGGTTTGTACTATTCTATCCTTCTCTGTTTTTCTGAATGTTGTTTTTAAGGGTTTCCATTTGATCTCTGATGATATGATGTATTGTCTATTGAGGGCAGATGTGGATTGCAAAGGCAGATTAGATCACTCTTATTGCTCAATGACGGGTGCGTCAACTTATCCTTTCCTGCAGTCAGCTGAGGGTAAATCGTGGGGAGGATGAGTTCTCATGGAACCACCTGCAATTTTTCCAAGACCAGCCCCCATGAAAATTGATGTCTTCTCTCATAAATGGCCTATCGGCACCACCCCCAGGGTGAACCAGGAAGCTGGAGAAACAATAAAGCTTAGGAACAATTTCTGGAAGAAAACAAAATGGATCCTTTGA 2016 0.4315 MLSLYIEMRKHNATYIHFELLNFIYVVPVVISLRIVQEGRVTPLTTILGMNKKFGGGIKPTGTPSMAWSSVVVVFSLLAGASIVHNIYKPNLTLPPVDGADETKQKVDEKEXQTQDLGHDMGMEHTRGSEYSILSAVGEMEVIGLFLGMEKTLVGISQPFKWASIKSGRIKFCIWIWLLDLASLVMQNLIKFTENMAVENFLFSKSKITHCNVQAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYMMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYELELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLYQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVCTILSFSVFLNVVFKGFHLISDDMMYCLLRADVDCKGRLDHSYCSMTGASTYPFLQSAEGKSWGGXVLMEPPAIFPRPAPMKIDVFSHKWPIGTTPRVNQEAGETIKLRNNFWKKTKWIL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2453 671 Gene3D Actin; Chain A, domain 4 376 467 - -
Lele07g2453 671 Gene3D - 211 552 - -
Lele07g2453 671 FunFam Actin, alpha skeletal muscle 205 353 - -
Lele07g2453 671 Pfam Actin 211 552 IPR004000 -
Lele07g2453 671 SUPERFAMILY Actin-like ATPase domain 343 552 IPR043129 -
Lele07g2453 671 FunFam Major actin 454 534 - -
Lele07g2453 671 Gene3D - 334 534 - -
Lele07g2453 671 PANTHER ACTIN 211 553 IPR004000 -
Lele07g2453 671 CDD NBD_sugar-kinase_HSP70_actin 270 377 - -
Lele07g2453 671 SMART actin_3 211 560 IPR004000 -
Lele07g2453 671 Pfam Domain of unknown function (DUF4516) 59 97 IPR027858 GO:0034551
Lele07g2453 671 SUPERFAMILY Actin-like ATPase domain 211 349 IPR043129 -
Lele07g2453 671 FunFam Actin, muscle 376 467 - -
Lele07g2453 671 ProSitePatterns Actins and actin-related proteins signature. 300 312 IPR020902 -
Lele07g2453 671 ProSitePatterns Actins signature 1. 249 259 IPR004001 -
Lele07g2453 671 PRINTS Actin signature 222 231 IPR004000 -
Lele07g2453 671 PRINTS Actin signature 257 279 IPR004000 -
Lele07g2453 671 PRINTS Actin signature 311 324 IPR004000 -
Lele07g2453 671 PRINTS Actin signature 336 355 IPR004000 -
Lele07g2453 671 PRINTS Actin signature 245 256 IPR004000 -
Lele07g2453 671 PRINTS Actin signature 432 448 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2453 Lele-ChrLele07 29883757 29894660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2453 213 551 Cytoskeleton Gene Families AT3G12110 95.870 0.0 679