Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2429 ATGCACGGTAAACGAATTTGCGAAACGACCTCTTCTCTCAACTTCTGCACACCTCGGCGTCAGCCGTCAAGCCCTTCGCAGTTCACAGTTCTCTCAATCTCGACGGCGGCTGCCACCGTAAAGTTGGGGGATCGATGGCCTCTAAAATGGAAATTAATAATCCTACCGATGCTTCTCCGTCATCGTAAGCACGAGCCAAAGAATGTATTCAAAGATCCAGATGATGGCCGGCAGCGATTTTTGCTTGAGTTGGAGTTTGTTCAATGCCTTGCTAATCCCACCTACACTCACTGTATGCTTTTTTCCTTACATTGCTTTAAATGCTTTGGGTTCAATGTTTTGCTAATCCCATGGTATCCTCATTGCCTTTTCTTTCTCGAACTTCTCCAGAATGCAAATTTCCGAAATGCAATGGCACATCCTGGCAATAAGGAACTTGCACATAGACAACAATTTTACTTCTGGAAGAACTATAAGAACAATAGGTTGAAGCACATTTTACCGAGGTCACTCCCTGAATCTAGCGCCACACCCGCACCTCCTGCGGCTGCCTCTGCATCTCAGCTGCCAGTGCCTTCTCTGCCACCAGTACCAGCTGCAAATGTTCCGGCGACAGTATCATCTGCTCAGGCTCTTTCTCCAATGCCATATGGTATGCCGCCTGGATCTGCCCTTCCGAAAAATGATACGAGGAATACTGCACTTGATAGGAGGAAGAGAAAGTAA 726 0.4697 MHGKRICETTSSLNFCTPRRQPSSPSQFTVLSISTAAATVKLGDRWPLKWKLIILPMLLRHRKHEPKNVFKDPDDGRQRFLLELEFVQCLANPTYTHCMLFSLHCFKCFGFNVLLIPWYPHCLFFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYKNNRLKHILPRSLPESSATPAPPAAASASQLPVPSLPPVPAANVPATVSSAQALSPMPYGMPPGSALPKNDTRNTALDRRKRK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2429 241 MobiDBLite consensus disorder prediction 171 190 - -
Lele07g2429 241 Pfam SOH1 119 158 IPR008831 GO:0003712|GO:0006355|GO:0016592
Lele07g2429 241 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 66 97 IPR008831 GO:0003712|GO:0006355|GO:0016592
Lele07g2429 241 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 65 155 IPR038089 -
Lele07g2429 241 MobiDBLite consensus disorder prediction 211 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2429 Lele-ChrLele07 29659051 29661501 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Lele07g2429 Med31 1e-05 No_clan