Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2423 ATGGGGAAGCCAAGAAGAACACAGATTCTTCTTCTCTGTTTCATGACACTTAATGTCTGGCTTTCTTCTTGTTCTTCTTCTGCAAATGCTTTGCTGTCTTCTAAAGGAGTGAACTTTGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTGGTTGATCCTCATGGAGTTTTAGATACTTGGGATGGAGATGCTGTTGATCCTTGTAGCTGGACCATGGTCACCTGTTCTTCTGACAACCTTGTCGTTAGTCTGGGGGCTCCTAGTCAAAGCTTATCTGGTACTTTGTCTCCCACCATAGGAAACCTCACAAACCTTCAGACTCTGTTGTTACAGAATAATAACATAACAGGTACAATTCCTTCGGAACTAGGGAAGCTATCAAAGCTGCAAACTTTAGATCTGTCAAATAACTTGTTCAATGGGGAAATTCCTGCTTCTTTAGGCCACATGAGCAAGCTGCAATACGTGAGGCTGAATAATAATAGTCTTTCTGGAGAATGTCCAGAGTCACTGGCCAACATGACACAACTTGCTTTTCTTGATTTGTCCTACAACAATCTGAGTGAGCCTGTGCCCAGAATTCTGGCCAAATCATTCAGCATTGTTGGAAATCCTCTCATCTGTGGTACTGGGAAAGAAGAAACCTGCCATGGGATGTCGCTGAAGCCTATGTACATGAACTTAAACAATACCCAAGATTCTCAACCTTCTGGCAGACAAAAAACACACAAAGTGGCTATTGCCTTTGGTTTGAGCCTAGGATGTCTCTGTCTCATAGTTGTTTGTTTTGGATTATTTCTCTTGTGGAGGCATAAGCATCATCAACAAGCATTCTTTGATGTCAAAGATCGCCATCATGAGGAAGTGTATCTGGGGAATTTGAAGAGGTTTCATTTCAGAGAGCTGCAGATTGCTACAAACAATTTCAGCAACAAGAACATACTCGGAAAAGGCGGGTTCGGACACGTGTACAAGGGAGTTCTTCAAGATGGAACAGTGGTAGCAGTGAAGAGGCTTAGAGATGGGAATGCCATTGGAGGAGAAATACAGTTTCAGACTGAAGTTGAGATGATAAGCTTGGCAGTACACAGAAACCTCCTCAAACTCTATGGTTTCTGTATGACTCCCACTGAAAGGCTTCTGGTTTACCCTTTTATGCCTAATGGCAGTGTTGCTTCTCGCCTCAAAGCAAAACCAGTGTTGGACTGGGGAACAAGGAAACAAATAGCATTAGGAGCAGCAAGGGGATTGCTATACCTTCATGAGCAGTGTGATCCAAAGATAATTCACAGGGATGTGAAAGCTGCAAACATATTACTTGATGAGTACTATGAAGCAGTGGTTGGAGATTTTGGATTGGCAAAGCTTTTGGACCATCAAGATTCTCATGTGACCACTGCTGTGAGGGGTACTGTGGGCCACATTGCACCTGAATATCTCTCCACAGGGCAGTCCTCAGAGAAAACTGATGTCTTTGGATTTGGTATTCTTCTTCTTGAGTTGATCACTGGCCTTAGGGCACTTGACTTTGGAAAAGCTTCTAATCAGAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCAAGAGAAGAAACTGGAACTGCTAGTGGACAAGGATTTGAAGAGCAACTATGACAGAATAGAGCTAGAAGAAATGGTAAAAGTGGCACTTCTGAGTACACAATATGTTCCAGGGCAGAGACCTAAAATGTCAGAAGTAGTGAGAATGCTGGAAGGAGATGGACTTGCAGAGAGATGGGAAGCTTCCCAACAACTAAGAGCTCATCATCATCATCATGAAACAAGCAAATCCAAACATAATGCCCATGAATTCTCTTCTTCAGATCGCTATTCTGATCTCACTGATGATTCTTCTTTGTTAGTTCAAGACATGGAGCTTTCCGGCCCAAGGTGA 1920 0.4271 MGKPRRTQILLLCFMTLNVWLSSCSSSANALLSSKGVNFEVQALMGIKASLVDPHGVLDTWDGDAVDPCSWTMVTCSSDNLVVSLGAPSQSLSGTLSPTIGNLTNLQTLLLQNNNITGTIPSELGKLSKLQTLDLSNNLFNGEIPASLGHMSKLQYVRLNNNSLSGECPESLANMTQLAFLDLSYNNLSEPVPRILAKSFSIVGNPLICGTGKEETCHGMSLKPMYMNLNNTQDSQPSGRQKTHKVAIAFGLSLGCLCLIVVCFGLFLLWRHKHHQQAFFDVKDRHHEEVYLGNLKRFHFRELQIATNNFSNKNILGKGGFGHVYKGVLQDGTVVAVKRLRDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPFMPNGSVASRLKAKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALDFGKASNQKGAMLDWVKKIHQEKKLELLVDKDLKSNYDRIELEEMVKVALLSTQYVPGQRPKMSEVVRMLEGDGLAERWEASQQLRAHHHHHETSKSKHNAHEFSSSDRYSDLTDDSSLLVQDMELSGPR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2423 639 Gene3D Phosphorylase Kinase; domain 1 279 386 - -
Lele07g2423 639 FunFam Somatic embryogenesis receptor kinase 1 279 386 - -
Lele07g2423 639 SUPERFAMILY Protein kinase-like (PK-like) 294 590 IPR011009 -
Lele07g2423 639 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Lele07g2423 639 Pfam Leucine Rich repeats (2 copies) 104 144 IPR025875 -
Lele07g2423 639 SUPERFAMILY L domain-like 40 236 - -
Lele07g2423 639 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 590 - -
Lele07g2423 639 FunFam Putative LRR receptor-like serine/threonine-protein kinase 37 219 - -
Lele07g2423 639 Gene3D Transferase(Phosphotransferase) domain 1 387 599 - -
Lele07g2423 639 SMART LRR_typ_2 103 126 IPR003591 -
Lele07g2423 639 SMART LRR_typ_2 175 198 IPR003591 -
Lele07g2423 639 SMART LRR_typ_2 151 174 IPR003591 -
Lele07g2423 639 SMART LRR_typ_2 127 150 IPR003591 -
Lele07g2423 639 Gene3D Ribonuclease Inhibitor 37 219 IPR032675 -
Lele07g2423 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Lele07g2423 639 SMART serkin_6 310 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2423 639 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Lele07g2423 639 FunFam Somatic embryogenesis receptor-like kinase 1 387 599 - -
Lele07g2423 639 Pfam Protein kinase domain 311 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2423 639 ProSiteProfiles Protein kinase domain profile. 310 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2423 639 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Lele07g2423 639 MobiDBLite consensus disorder prediction 591 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2423 Lele-ChrLele07 29551788 29556527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2423 11 639 Receptor kinase-like Gene Family AT5G16000 74.566 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele07g2423 Pkinase 5.1e-43 CL0016