Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2407 ATGGCTTCCCCAAATTCTTCCCCTTCTGCTGTTACCCCCACTTCTGCGGATAATTCTCCATCAAATTCTCTCATATCATCACAGCCTCCTACTTCTTCCCCAAGTCAAACCTCTAATACCCCTGCTCCTTCATCTCCTTCTGACACTTCAAACCCCCCTCCTTCCCCATCTCTTTCTCCTCCACCAGCTACACCGCCGCCAACTTCTTCCCCACCTCCGGCATTGCCACCGCCAGCTTCACCCCCTCCTGAAGCATTGACACCACCAGCTTCGCCCCCACCTGAATCATTGCCACCACCGGCTTCAACCCCACCTCCGGCATTGCCACCACCATCTTTACCATCTACACCAAATTCTCCATCACCACCAACACCTTCAGCAGTGCCACCACCATCACCGCCACCACCATCTGCTTCCACCCCTCCTCCAGCAGACAAGTCACCTGCTGCTCCAAATTTATCCCCACCACCTCCAGTTGAAGTTTCTCCTCCTCCCCAGGCCTCAAAGGAACCTCCTGCAGCAGATCCACCTCCCTCTCGTCGCAATTCACCTCCTCCTCCTCCACCAAAGAATGTCCCAAAATCACCATCCTCCAGTTCCCCTCCTCCACCTCGGATAAAGCCGCCAGAAAGTGCTCCTGCTCTCACACCCCCACCATCTGTTTCCGAATCTCCCCCTTCTCCTGCTGCAGATGATCCTCCTCAATCCGCAACACCATCACCTCCTCCTTCAGTTCCAACAGCCTCTTCATCTCCACCAACTGCTTTACCTTCTCCTCCAACTAATTCATCAGCAGCTGGGGGCCCATTGGCAGCCCTACCATCTATTCCAACAGAGAAACCAACTGCAAAATCGACTGATAATACTAGTGTAACTGCAAATGCCCCACCTACACATACAAAGGGGTTAAGTACAGGAGGAGGTGTGGCTATTGGTGTCATAGTGGGTTTTCTTGTCCTCAGCCTTCTAATGATGGCTGTGTGGTTTGTAAAACGAAAGAGGAAGCAAACAGGATCAAAAGTTGGTTATGCTATGACCTCTCCATTTGGCTCATCTCAGAATTCAGGTACCATATTCTTGAGGCCACAGCCTCCATCTCCCTATTGTGGTAGTAACTCAGGTAGTGGCCTCATGTATTCTCCATCAGAGCCTGGTGGAGTAAGTCAGTCAAGATCATCATTCACGTATGAAGAACTAGCGCAAGCGACAAATGGGTTTTCAGCACATAACCTTTTGGGTGAAGGTGGATTTGGTTGTGTCTTCAAAGGTTTGCTTGCTGATGGAAGAGAAGTTGCTGTGAAACAGCTCAAAATTGGTGGCGGACAAGGAGAACGTGAATTTCAAGCAGAAGTGGAGATTATTAGCCGAGTACATCACCGCCATCTGGTTTCCTTGGTGGGTTACTGTATATCACAGCATCAAAGATTGCTTGTCTATGACTATTTGCCCAACAATACCCTTCATTACCATCTTCACGGTGAAGACAGGCCAGTTTTGGACTGGGCTACCAGAGTCAAGATTGCTGCTGGTTCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATCAAGTCATCAAACATCCTTCTTGACAACAACTTTGAAGCTCGAGTTTCAGATTTTGGGCTTGCGAAATTAGCCTTGGATTCAAACACACATGTAACTACTCGCGTAATGGGAACCTTTGGGTATATGGCACCAGAGTATGCAACAAGTGGGAAGTTGACTGAAAAATCTGATGTTTATTCTTGTGGCGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCAATTGGTGATGAAAGCCTGGTTGAATGGGCTCGGCCTTTGCTAACTGAAGTACTTGATAACGAAGACTTTGAAATATTGGCGGATCCAAAGTTAGAGAAGAACTATAATAGAAATGAAATGTTCCGGATGATCGAGGCAGCTGCAGCCTGTGTGCGTCACTCAGCAGCAAAGAGGCCCCGAATGAGTCAGGTGGTGAGAGCTTTAGATTTGATGGATGAACTAGCAGATCTGAATAATGGAATGAAGCCTGGGCAGAGCTCAGTGTTTGATTCTGCAGAGCAAAATGAACAAATCAGAATGTTCAGGAGGCTGGCTTTTGGAAGCCAGGATTACAGTAGCAGTTATTTCAATGACTCTCATAGTAGCTGGCGAAGTAGAGATCAAGGCCACCAGACCTCTACTTCCTTCTCCCAAAATAGGTCTGGACCATGGAACGTGGGATACCATGTACACAGGGTACCTGCTAATGCTGATACTTTTCCCAGAGAAGTTGAAGCATCTCTTGATTCAGATGATTTACACACAGCATAA 2364 0.4814 MASPNSSPSAVTPTSADNSPSNSLISSQPPTSSPSQTSNTPAPSSPSDTSNPPPSPSLSPPPATPPPTSSPPPALPPPASPPPEALTPPASPPPESLPPPASTPPPALPPPSLPSTPNSPSPPTPSAVPPPSPPPPSASTPPPADKSPAAPNLSPPPPVEVSPPPQASKEPPAADPPPSRRNSPPPPPPKNVPKSPSSSSPPPPRIKPPESAPALTPPPSVSESPPSPAADDPPQSATPSPPPSVPTASSSPPTALPSPPTNSSAAGGPLAALPSIPTEKPTAKSTDNTSVTANAPPTHTKGLSTGGGVAIGVIVGFLVLSLLMMAVWFVKRKRKQTGSKVGYAMTSPFGSSQNSGTIFLRPQPPSPYCGSNSGSGLMYSPSEPGGVSQSRSSFTYEELAQATNGFSAHNLLGEGGFGCVFKGLLADGREVAVKQLKIGGGQGEREFQAEVEIISRVHHRHLVSLVGYCISQHQRLLVYDYLPNNTLHYHLHGEDRPVLDWATRVKIAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEARVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSCGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEVLDNEDFEILADPKLEKNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVVRALDLMDELADLNNGMKPGQSSVFDSAEQNEQIRMFRRLAFGSQDYSSSYFNDSHSSWRSRDQGHQTSTSFSQNRSGPWNVGYHVHRVPANADTFPREVEASLDSDDLHTA 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2407 787 MobiDBLite consensus disorder prediction 1 45 - -
Lele07g2407 787 MobiDBLite consensus disorder prediction 1 301 - -
Lele07g2407 787 MobiDBLite consensus disorder prediction 279 301 - -
Lele07g2407 787 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 318 724 - -
Lele07g2407 787 Gene3D Transferase(Phosphotransferase) domain 1 482 698 - -
Lele07g2407 787 CDD STKc_IRAK 412 682 - -
Lele07g2407 787 SMART serkin_6 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2407 787 MobiDBLite consensus disorder prediction 728 754 - -
Lele07g2407 787 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2407 787 FunFam proline-rich receptor-like protein kinase PERK8 482 694 - -
Lele07g2407 787 SUPERFAMILY Protein kinase-like (PK-like) 384 680 IPR011009 -
Lele07g2407 787 MobiDBLite consensus disorder prediction 46 259 - -
Lele07g2407 787 Gene3D Phosphorylase Kinase; domain 1 381 481 - -
Lele07g2407 787 Pfam Protein kinase domain 408 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2407 787 FunFam Proline-rich receptor-like protein kinase PERK8 378 481 - -
Lele07g2407 787 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Lele07g2407 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2407 Lele-ChrLele07 29361302 29367526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2407 263 752 Trihelix Transcription Factor Family AT1G70460 54.406 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele07g2407 Pkinase 7.5e-46 CL0016