Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2395 ATGGTCAATTTCAGAATCGCGGGCTCCAGAAAATCTGATTGCTATGAAGGTGTTCTTGCGCCGATGCCCTGTGATAAGAGAGATCAAATTATGGTTGGAACTGATTTAGTTTCCTTTGGGGTCTCTGTTGGTTTGGCCTGTGGAATATTGATAGCTTGTCTCATATGTTTGGTCATAAAGTGGTATAAGAGGCGTGCTCATCTTAGACGTTGTGCAAATGAACGTAGTCTAACCACACTTCCTATACGTACAAATGGATTGGAAACAAGCATTGACTTCAGTGCTTCTCTTGCAAGCTCCATCGCTGCTCCAATGTCAGACAATCTTCAGAAAGATTCCCATTTCTCTTGGTGGAAACGTTCAAAGAAAGATCAGTTTACATCCTCATCAAGCATTCTTAGATACTCATTCAAAGAAATTCAGAAGGCAACACAAAATTTCACAACTATCTTGGGAGAAGGATCATTTGGCACAGTTCATAAAGCAGCAATGCCTACTGGCGAGGTGGTAGCTGTAAAGGTGCTTGGTTCTGATTCCAAACAAGGCGAGAAAGAATTCCAAACAGAGGTACTTTTGCTAGGAAGACTGCATCATCGGAATCTTGTAAATTTGTTAGGATATTGTGTAGATAAAGGACAACGCATTTTGATTTATGAGTTCATGAGCAATGGAAGTCTAGAAAAGCTTATACATGGTGAAGAAAAGGTTTTAAGTTGGGATGAAAGGCTGCAAATTTCTGTTGATATTTCACATGGAATTGAATACCTTCATGAAGGAGCAGTCCCGCCCGTCATACACCGTGATTTGAAATCTGCCAATATATTGTTAGATCACTCAATGCGAGCTAAGGTGGCTGATTTTGGGCTGTCCAAGGAGGAAGTCTTCGATGGGCGAAATTCTGGCTTGAAAGGCACATATGGCTACATAGACCCATCATACATTTCCACTAACAAGTTCACAATGAAAAGTGACATTTACAGTTTCGGTATCATCATTTTCGAGCTCATCACTTCCATTCATCCTCAACAGAATTTGATGGAATACATTAACCTTGCTGCAATGGATCATGATGGTGTTGATGGAATACTTGACAAGAACCTGGTGGGAAAATGCAACATTGAAGAAGTGAGAAAGCTTGCTAAGGTTGGACACAAGTGCTTGCACAAATCACCCAGGAAACGTCCTTCAATTTATGAGGTTTCACAGGCTTTATCCAGCATAAGACAGAGACGAAGCCTTTTGAAAGAAAACACCATGTCATTTGCTGCCTCTAGCTTTTCCAGAGCTTTGAGCAGACTTGAGGATCAACAGGTTGAGTTAAGCAGGATAGCCACCATGGCCCACTAG 1347 0.4135 MVNFRIAGSRKSDCYEGVLAPMPCDKRDQIMVGTDLVSFGVSVGLACGILIACLICLVIKWYKRRAHLRRCANERSLTTLPIRTNGLETSIDFSASLASSIAAPMSDNLQKDSHFSWWKRSKKDQFTSSSSILRYSFKEIQKATQNFTTILGEGSFGTVHKAAMPTGEVVAVKVLGSDSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCVDKGQRILIYEFMSNGSLEKLIHGEEKVLSWDERLQISVDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPSYISTNKFTMKSDIYSFGIIIFELITSIHPQQNLMEYINLAAMDHDGVDGILDKNLVGKCNIEEVRKLAKVGHKCLHKSPRKRPSIYEVSQALSSIRQRRSLLKENTMSFAASSFSRALSRLEDQQVELSRIATMAH 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2395 448 SMART serkin_6 145 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2395 448 ProSiteProfiles Protein kinase domain profile. 145 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2395 448 Pfam Protein tyrosine and serine/threonine kinase 147 404 IPR001245 GO:0004672|GO:0006468
Lele07g2395 448 FunFam serine/threonine-protein kinase PBS1-like 116 220 - -
Lele07g2395 448 Gene3D Phosphorylase Kinase; domain 1 110 220 - -
Lele07g2395 448 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 221 429 - -
Lele07g2395 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Lele07g2395 448 SUPERFAMILY Protein kinase-like (PK-like) 116 402 IPR011009 -
Lele07g2395 448 Gene3D Transferase(Phosphotransferase) domain 1 221 428 - -
Lele07g2395 448 CDD STKc_IRAK 151 407 - -
Lele07g2395 448 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 420 - -
Lele07g2395 448 ProSitePatterns Protein kinases ATP-binding region signature. 151 173 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2395 Lele-ChrLele07 29217628 29222418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2395 136 411 Receptor kinase-like Gene Family AT1G67720 43.599 1.58e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lele07g2395 PK_Tyr_Ser-Thr 2.4e-48 CL0016