Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2393 ATGGCTCGGTTTGCGAGAGGTCAGCAACAAGAATTGGAAGACGACGACGACGACGAAGATCACCTGACTGGAAATGTGTCTTCTTCACAGAAAGTGAAGGTGGATGAAGCGACTAGAGAGCAGCGGGTTAACGCACATCGTTCTAAGCATTCAGAAACCGAGCAGCGTAGAAGGAGCAAGATAAATGAGAGGCAAGCTAAATGTGACTAATTTCAGATTCTGAGAGATCTCATTCCTCAAAATGATCAAAAAAGGGATAAGGCTTCTTTCTTGTTGGAGGTTATTGAGTATATTCAATTTCTACATGAGAAATTACAAATGTATGAGCAATCTTACCAAGGGTGGAATCAGGAGCCAATGAAATTAATTCCTTGGAGAAATCATCGTGGACCTACAGATAATGTCACATCTCAGGCTATACAAAATGGTTCTGGTCATGAGAACAATGATGTTGTCTCTCCGTCACTGCCCTTAAATGCACAGAATACAATTGAATCTGACTTGTCATCAATTATTCATAAGGCCGGCCCCCATGGTTTAGCTTCTGATGCAGTTCCTTTGGGTATGCAAATGCGGTTGGACATGTTTGATCCGACTGTGAGCAGTGGCATTCCAACCCAGCATTTACATGAAGCAGTATCTAACACTGAGAACATGCCTTCCCATACTCAGCCTCAGGCGTGTCTTGGCGAACCTAAGGAGTGTACATATGATTTTCCAAATAATACATTGAAGGAACAGGACGAGCTGACATTTGAAAGTGAATCAGTTAGCATCTCAACAGCCTATTCTCAAGGAGTATTGGATACTTTTGTGCAATCATTGCGATCTTCAGGTGTGGATTTATCTGAGGCCAATGTTTCAGTACAAATTGATGTAGGGAGACGATCAATGGCCTCCACATCTTGCTCAAAGGATCATGAGAACCAATTTGTGAACACCCCATCAGTGCCATGTTCAGGAGTGGACTACTACAGTGAGGATTCTGAACAAGCTCCTCTTAAGAGGCTCAGAACAGAAGAGAGTTAG 1029 0.4286 MARFARGQQQELEDDDDDEDHLTGNVSSSQKVKVDEATREQRVNAHRSKHSETEQRRRSKINERQAKCDXFQILRDLIPQNDQKRDKASFLLEVIEYIQFLHEKLQMYEQSYQGWNQEPMKLIPWRNHRGPTDNVTSQAIQNGSGHENNDVVSPSLPLNAQNTIESDLSSIIHKAGPHGLASDAVPLGMQMRLDMFDPTVSSGIPTQHLHEAVSNTENMPSHTQPQACLGEPKECTYDFPNNTLKEQDELTFESESVSISTAYSQGVLDTFVQSLRSSGVDLSEANVSVQIDVGRRSMASTSCSKDHENQFVNTPSVPCSGVDYYSEDSEQAPLKRLRTEES 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2393 342 MobiDBLite consensus disorder prediction 130 157 - -
Lele07g2393 342 Gene3D - 43 122 IPR036638 GO:0046983
Lele07g2393 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 128 IPR036638 GO:0046983
Lele07g2393 342 SMART finulus 51 107 IPR011598 GO:0046983
Lele07g2393 342 MobiDBLite consensus disorder prediction 124 157 - -
Lele07g2393 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 101 IPR011598 GO:0046983
Lele07g2393 342 Coils Coil 98 118 - -
Lele07g2393 342 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 6 340 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lele07g2393 342 CDD bHLH_AtBIM_like 44 126 - -
Lele07g2393 342 Pfam Helix-loop-helix DNA-binding domain 47 101 IPR011598 GO:0046983
Lele07g2393 342 MobiDBLite consensus disorder prediction 1 63 - -
Lele07g2393 342 MobiDBLite consensus disorder prediction 33 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2393 Lele-ChrLele07 29197282 29202385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2393 3 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 37.785 2.01e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele07g2393 HLH 5.5e-10 No_clan