Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2385 ATGGCTGTGTCTGTGTCTTGTTTCTTCTCGTTTCAGTTGTTTATGGCCATTATCTCTTTCTCTGCCATGGCTTCGTTTGCCTTTGATGGAAGCTGGCATGATGCTCATGCAACCTTCTATGGTGACATGTCCGGAGGAGAAACCATGCAAGGAGCTTGTGGTTATGGAGACCTCTTCAAGCAAGGTTATGGCCTGGAAACGGCAGCACTAAGCACAGCTCTGTTCAACAATGGCCTCACGTGCGGGGCATGCTTTGAGCTCGAGTGCATCAACGACCCGCAATGGTGCATCTCCGGCGCCGGCACCATTAAGATCACCGCCACCAACTTCTGTCCGCCCAACCACGATCCTCCAGACGTTAACCATTGGTGCAACCCTCCCCAGGAGCACTTCGACCTCTCCATGCCCATGTTTACGAAGCTCGCCCACTACAAAGCCGGCATCATCCCCGTCCGCTACAGCCGTGTCGCGTGCTCCAAGTCCGGCGGTGTCAAGATCGAGCTCAAGGGCAACCCTTACTGGATAACCGCACTTTTCTTCAACGTCGGCAACGCCGGTGATGTCACCGAAGCAAAGATCAGAGGTGGTAAAGGCGGCGGGTGGATTCAGATGTCGAGGAACTGGGGTCAGGTCTGGCAAACGGGGACAAACTTAGTGGGACAAAACTTGTCGTTTAAGGTTACTACAAGTGATGGGAAGACGTTGGAGTTTGATAATGTTGTGCCGTCGAATTGGCAGTTTGGTCAGACTTATGAGGGAAAGCAGAACTTTTAA 774 0.5245 MAVSVSCFFSFQLFMAIISFSAMASFAFDGSWHDAHATFYGDMSGGETMQGACGYGDLFKQGYGLETAALSTALFNNGLTCGACFELECINDPQWCISGAGTIKITATNFCPPNHDPPDVNHWCNPPQEHFDLSMPMFTKLAHYKAGIIPVRYSRVACSKSGGVKIELKGNPYWITALFFNVGNAGDVTEAKIRGGKGGGWIQMSRNWGQVWQTGTNLVGQNLSFKVTTSDGKTLEFDNVVPSNWQFGQTYEGKQNF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2385 257 Pfam Expansin C-terminal domain 164 242 IPR007117 -
Lele07g2385 257 PRINTS Expansin signature 239 255 IPR002963 GO:0009664
Lele07g2385 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Lele07g2385 257 PRINTS Expansin signature 210 231 IPR002963 GO:0009664
Lele07g2385 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Lele07g2385 257 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Lele07g2385 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Lele07g2385 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Lele07g2385 257 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Lele07g2385 257 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Lele07g2385 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 253 IPR007117 -
Lele07g2385 257 Pfam Lytic transglycolase 67 153 IPR009009 -
Lele07g2385 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 163 IPR007112 -
Lele07g2385 257 SMART dpbb_1 67 153 IPR007112 -
Lele07g2385 257 Gene3D - 160 257 IPR036749 -
Lele07g2385 257 Gene3D - 17 159 IPR036908 -
Lele07g2385 257 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Lele07g2385 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Lele07g2385 257 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Lele07g2385 257 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Lele07g2385 257 PRINTS Expansin/Lol pI family signature 239 253 IPR007118 GO:0005576
Lele07g2385 257 PRINTS Expansin/Lol pI family signature 201 215 IPR007118 GO:0005576
Lele07g2385 257 PANTHER EXPANSIN-A15 14 255 IPR002963 GO:0009664
Lele07g2385 257 SUPERFAMILY PHL pollen allergen 160 253 IPR036749 -
Lele07g2385 257 SUPERFAMILY Barwin-like endoglucanases 31 181 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2385 Lele-ChrLele07 29070979 29072485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2385 28 257 Expansin Gene Family AT5G39280 64.348 2.14e-114 328