Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2380 ATGATAGTGGCCACCAAAATAAGTCGTGTTTCTTCAATTCAGGTGGCCATTGTCGTGGTTATTTTTGCCGCCACCGTGGTGTTATCCGATGACAATGCGCTGATCCCGGCGGACAAAAATCAATTGAACAAATGGTTCTCAAAGAACGTGCGGCCATTATCATCCCGGAAGAAAACTCTGGACGCAGCGCTGGTGGCAGCAGAAGCTTCTCCTAAAGTTGTGACGGTGTCGCAGGACGGGAACGGCGACTTCAAGACGGTAACCGATGCCATTAACAGCGTGCCGTTGAATAACGTTCAGAGAGTGATAATCAGAATCGCGGGTGGAAATTATAGAGAGAAGATCAGCATTCCTAGGACAAAGGATTTCATCACTTTCCTTGGTGATCCTAAAAACATGCCCAACTTAACTTATAATGGCGACGCCAAAAGATACGGCACCGTTGATAGTGCTACACTCATTACCAACAGCAATTACTTCGTCGCTGCAAATATCATTTTTTCGAATTCAGCACCGATGCCGGACGGGCGAAGGGAGGGAGCTCAGGCGGTGGCGATCCGTGTGTCTGGCAATAACTCTGCATTCTACAACTGCAAAATGTTAGGGTTTCAGGACACAATATGCGACGACAGGGGAAACCATTTATTCAAGGACTGCACAATCCAAGGCACGGTGGACTTCATATTTGGGAGCGGCAAGTCGTTGTATCTAAACACGAAACTGTTGGTGGTGGGGAGCGTCGGAGGAGTAATCGTGGCTCAGGCGAGAGAGAGCGATGACGACACCATAGGGTTCTCCTTCGTGCACTGCGACATAAGTGGCACTGCCCATGGCACGTTCTTGGGAAGAGCTTGGATGTCTCATGGCAAAGTTGTGTATTCTTATACTTCCATGAGCAACATTATTGCCCCTCTTGGCTGGAACATTAACAACCATCCTTCCATGGCTCAGACTGTATATTTTGGAGTGTACCATAACAGTGGAGCTGGTGCAAAAACCGAAGGGCTTGCCCCCTTCACAAAGTTGCTGAGTGGCGATGATGCTAAAGAATTCCTCACTCTTGGCTTCATTCAAGCTTCTAAGTGGCTTCTTCCTCCTCCTCAAGCCTAA 1110 0.4829 MIVATKISRVSSIQVAIVVVIFAATVVLSDDNALIPADKNQLNKWFSKNVRPLSSRKKTLDAALVAAEASPKVVTVSQDGNGDFKTVTDAINSVPLNNVQRVIIRIAGGNYREKISIPRTKDFITFLGDPKNMPNLTYNGDAKRYGTVDSATLITNSNYFVAANIIFSNSAPMPDGRREGAQAVAIRVSGNNSAFYNCKMLGFQDTICDDRGNHLFKDCTIQGTVDFIFGSGKSLYLNTKLLVVGSVGGVIVAQARESDDDTIGFSFVHCDISGTAHGTFLGRAWMSHGKVVYSYTSMSNIIAPLGWNINNHPSMAQTVYFGVYHNSGAGAKTEGLAPFTKLLSGDDAKEFLTLGFIQASKWLLPPPQA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2380 369 Gene3D - 72 366 IPR012334 -
Lele07g2380 369 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Lele07g2380 369 Pfam Pectinesterase 74 358 IPR000070 GO:0030599|GO:0042545
Lele07g2380 369 SUPERFAMILY Pectin lyase-like 68 363 IPR011050 -
Lele07g2380 369 FunFam Pectinesterase 69 365 - -
Lele07g2380 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 64 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2380 Lele-ChrLele07 29026878 29030273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2380 9 367 Carbohydrate Esterase AT5G07410 53.611 6.18e-143 408