Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2375 ATGGAGCAGGAACACGAAGAGCATGAAGTGTACGGAGGCGATATCCCCGATGATGCGGAGATGGACGCAGATTTCAGAGTTGAGGAAGATGAAGACCAAGAAGGAGACCAACATGACCCCAATCACTCTAATAAGGACCTGGAGGATATGAAGAAGAGGCTCAAGGAAATTGAGGAAGAAGCTAATGCCCTCCGTGAAATGCAGGCTAAGGTTGAGAAAGAGATGGGTTCTGTTCAAGATTCAAGTGGTTCTTCAGCAAGTCAAGCTGAGAAGGAGGAAGTGGATTCCCGGTCAATCTATGTTGGTAATGTTGACTATGGATGTACACCTGAAGAAGTCCAGCAACATTTTCAGTCTTGTGGAACTGTGAACAGAGTGACGATATTGACAGACAAATTTGGTCAACCAAAAGGATTCGCTTATGTTGAGTTTGTTGAGGTTGATGCCATTCAGAATGCTCTCTTGTTGAATGAATCAGAGCTGCATGGTCGTCAATTGAAGGTCTCTGCAAAGCGTACAAACGTTCCTGGAATGAAACAGTATCGTGGAAGAAGACCTATGGGTTTTCGACCTAGAATGCCTTACATGCCTTCTCCATTCTATCCTCCATATGGTGGTTATGGGAGGTTTCCGAGGTATAGGCGTCCGACGCGTTACAGGCCATACTAG 669 0.4559 MEQEHEEHEVYGGDIPDDAEMDADFRVEEDEDQEGDQHDPNHSNKDLEDMKKRLKEIEEEANALREMQAKVEKEMGSVQDSSGSSASQAEKEEVDSRSIYVGNVDYGCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPMGFRPRMPYMPSPFYPPYGGYGRFPRYRRPTRYRPY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2375 222 MobiDBLite consensus disorder prediction 16 35 - -
Lele07g2375 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 20 207 - -
Lele07g2375 222 SUPERFAMILY RNA-binding domain, RBD 87 199 IPR035979 GO:0003676
Lele07g2375 222 MobiDBLite consensus disorder prediction 1 15 - -
Lele07g2375 222 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 167 IPR000504 GO:0003723
Lele07g2375 222 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 173 IPR000504 GO:0003723
Lele07g2375 222 SMART rrm1_1 98 169 IPR000504 GO:0003723
Lele07g2375 222 MobiDBLite consensus disorder prediction 36 73 - -
Lele07g2375 222 Coils Coil 44 74 - -
Lele07g2375 222 CDD RRM_II_PABPs 98 169 - -
Lele07g2375 222 Gene3D - 17 180 IPR012677 -
Lele07g2375 222 MobiDBLite consensus disorder prediction 75 89 - -
Lele07g2375 222 MobiDBLite consensus disorder prediction 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2375 Lele-ChrLele07 28951749 28959754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2375 98 169 Eukaryotic Initiation Factors Gene Family AT2G36660 34.211 4.43e-09 53.9