Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2373 ATGCCGGAGATGATGGCGCTGAATGTTGCAGCTAAATTCAACTCCAACGCCGCCGGCGTTAATGGTGGTCATCAGTTCGGCGACACCACGCTCACCAAAGTGTTTGTTGGTGGATTGGCTTGGGAGACTCCCAAGGACGCCATGAGAGAGCATTTCCAGAAGTACGGCGAGATCCTCGAGGCCGTTATTATCTCCGATAAGGCCACCGGCAGATCCAAGGGCTATGGCTTCGTGACCTTTAAGGAAGCTGAAGCTGCTAAGAAGGCTTGTGAGGATCCTACGCCGATCATCAATGGCCGCCGAGCCAACTGCAATCTGGCTTCGCTCGGCGCGCGACGCCCTAGGTCCACCAACACTTCACCGCGTCGTCAACAAGGATCGAACGGTGGAGGACCAAGGAACGCCCAAAGCGCACCACCCCCGCCAGCCAATCACGTCCCGTGGTATTATCCGGTGGGGACAACTGCTTCACATTTCCATCATCACCACCATCAACCTGTTCCTCTCTATGGGTACCCTCCAACGTACATTCCAACTGACACAAATTACAATCAGGAGCTAAGCTACACTGGCAGTGGGCCCTACATGAACGGTTACTACTCTCCAGTGTACCCGAGCCAGGCTATGGTGGGTGGGAACACATTGATGCCGATGTACCCTCTTTATCCGTACCATCCAACGCACACGATGGGCCTGCCTTCTCACATATTCCAGCCAACAACAGCGGGGCACGTGGTCATCATGTCGAAGCCCGCGTCCATCACTCCCAACACAGGTGCGTCACATGGTAACATGTCCAACCCCAACCCCAGTCAATTTCTGTAA 825 0.5479 MPEMMALNVAAKFNSNAAGVNGGHQFGDTTLTKVFVGGLAWETPKDAMREHFQKYGEILEAVIISDKATGRSKGYGFVTFKEAEAAKKACEDPTPIINGRRANCNLASLGARRPRSTNTSPRRQQGSNGGGPRNAQSAPPPPANHVPWYYPVGTTASHFHHHHHQPVPLYGYPPTYIPTDTNYNQELSYTGSGPYMNGYYSPVYPSQAMVGGNTLMPMYPLYPYHPTHTMGLPSHIFQPTTAGHVVIMSKPASITPNTGASHGNMSNPNPSQFL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2373 274 SUPERFAMILY RNA-binding domain, RBD 29 134 IPR035979 GO:0003676
Lele07g2373 274 Gene3D - 27 138 IPR012677 -
Lele07g2373 274 CDD RRM_RBM24_RBM38_like 32 107 - -
Lele07g2373 274 FunFam Putative RNA-binding protein ARP1 26 115 - -
Lele07g2373 274 MobiDBLite consensus disorder prediction 110 134 - -
Lele07g2373 274 SMART rrm1_1 33 105 IPR000504 GO:0003723
Lele07g2373 274 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 91 IPR000504 GO:0003723
Lele07g2373 274 MobiDBLite consensus disorder prediction 107 146 - -
Lele07g2373 274 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 109 IPR000504 GO:0003723
Lele07g2373 274 PANTHER BOULE-RELATED 17 262 IPR037366 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2373 Lele-ChrLele07 28913633 28916502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2373 28 108 C2H2 Transcription Factor Family AT2G19380 41.975 4.54e-16 75.9