Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2367 ATGTTGGATCTCAATGTCGATATGAAAGGTTCTCATCTCCAAAGGGAAGAAGACTCTGGTACTTCCAACTCCTCTGTGCTGAATTTTGAAGAATCTCGAGACGAAGATTCTTCTGCCTTCGTGTTCGACATACTGAAGAGAGAAACAAATTGTCGGGTTGAACATGAAGAGAAGGAGACGCCAGAAGAAATCACGACAAAGCCACTTTTCCCTGTGAATAGTGACGAGAAGGGACGCAGAGATTGTGATTTGCGATTGGGATTCTCATGTTCGAGAAGTAATCAATGGCTGAACCTTTCCTTCGCTGAGAGTGGTGCTGCTGGCACGCAAGGTGAATTGAGAGTGTTACAGCAAAAGCAACCCCAAATAAGGAAAAGCAGAAGAGGGCCCAGGTCTCGAAGTTCACAGTACAGGGGTGTTACTTTCTATCGGAGGACTGGTCGATGGGAGTCCCATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTTGACACTGCACATACTGCAGCAAGAGCATATGATAGGGCTGCAATTAAGTTCAGAGGAGTTGATGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAGGTTTGAGTAAAGAGGAGTTTGTCCAAGTCCTTCGCCGACAATGCTCTGGTATCCCAAGAGGGAGCTCAAAATATAGAGGTCTTTCTCTCAACAAATGGGGTCAATGGGAAGCACAAGCCAGCCTTTTCCTTGGCAAAAAGCTTTATGACAAGCTACCCATCAAGAGTGATGGAATAGGATTGGTGACTGGCTTTGAGCCTAGAAAGGGAGAGAGAACTATTGAGTCCAGCAGAGGAGGGAATCATCAAAATCTGGATTTGAGCCTTGGAATTTCTCCACCTTCTGATGAATCCAAGAAGAATGATGCTGCCAGAGGCTTTTCTTTTCGTTATACAGCTTGTGAGAAACCTAACAAAGGAGGGCCAATGGCTGATGGCACTGGTGCTGCATTGATAAGGGGACAAGCCATTTATGGTGTGGCAATGCCATCTAAATATGACCAAATATGCTCTGGCTTATATCCCGGTTATGTACAGAATTATGAGGAGAAGGCCATAGAAAAGAGAAGTGTTGTTCCTTTATCAAGATTCCCAAATTTGGCTTGGCAACTTCACAGCAACGGTAGCATCGCGCCGGTGCCAGTGTTTTCTAATGCAGCGTCATCAAAATTCATTTCTTCTAGCAACAATGGTGAACCAGCAGCCCCACATGAAATAATCAACCCTCATGATAACAATTCCATCTACAATTTGTGCTTCAGTTCAACCCCAACATCCACACTTAATAACTCCCCAAGTTGCCAAAGTCTTAGTAGCTGA 1371 0.4435 MLDLNVDMKGSHLQREEDSGTSNSSVLNFEESRDEDSSAFVFDILKRETNCRVEHEEKETPEEITTKPLFPVNSDEKGRRDCDLRLGFSCSRSNQWLNLSFAESGAAGTQGELRVLQQKQPQIRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINFSLSDYEEDMKMMKGLSKEEFVQVLRRQCSGIPRGSSKYRGLSLNKWGQWEAQASLFLGKKLYDKLPIKSDGIGLVTGFEPRKGERTIESSRGGNHQNLDLSLGISPPSDESKKNDAARGFSFRYTACEKPNKGGPMADGTGAALIRGQAIYGVAMPSKYDQICSGLYPGYVQNYEEKAIEKRSVVPLSRFPNLAWQLHSNGSIAPVPVFSNAASSKFISSSNNGEPAAPHEIINPHDNNSIYNLCFSSTPTSTLNNSPSCQSLSS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2367 456 MobiDBLite consensus disorder prediction 276 306 - -
Lele07g2367 456 MobiDBLite consensus disorder prediction 1 35 - -
Lele07g2367 456 MobiDBLite consensus disorder prediction 117 137 - -
Lele07g2367 456 SMART rav1_2 136 198 IPR001471 GO:0003700|GO:0006355
Lele07g2367 456 MobiDBLite consensus disorder prediction 281 299 - -
Lele07g2367 456 Gene3D AP2/ERF domain 135 194 IPR036955 GO:0003700|GO:0006355
Lele07g2367 456 ProSiteProfiles AP2/ERF domain profile. 136 192 IPR001471 GO:0003700|GO:0006355
Lele07g2367 456 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 299 - -
Lele07g2367 456 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Lele07g2367 456 SUPERFAMILY DNA-binding domain 135 193 IPR016177 GO:0003677
Lele07g2367 456 CDD AP2 136 191 IPR001471 GO:0003700|GO:0006355
Lele07g2367 456 FunFam AP2-like ethylene-responsive transcription factor 135 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2367 Lele-ChrLele07 28850173 28853564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2367 1 429 AP2-EREBP Transcription Factor Family AT5G60120 40.042 1.61e-66 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g2367 AP2 6.6e-10 CL0081