Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2350 ATGGAGACAAAGGTCTGGACTTCAGCAATTTTCCGTTTGGTCGTGATAGTTTATTCAGTATGGCTGATTTCTGCTAACATGGAAGGCGATGCTTTGCATAGCCTGAGGACAAATTTACAGGATCCTAGCAATGTTTTGTCAAGTTGGGATCCTACACTTGTCAATCCATGCACATGGTTTCATGTAACTTGCAACAATGATAATAGTGTTATAAGAGTTGATCTAGGAAATGCTGCTTTATCTGGTCAACTTGTTCCACAGCTAGGCCAGCTCAAAAACTTGCAGTATTTGGAACTTTATAGCAATAACATTACTGGCCCAATTCCGAGCGACCTGGGTAATCTGACTAACTTGGTGAGCTTGGATCTGTACTTAAACAGCTTCTCTGGTCCTATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGATTCCTCCGGCTTAACAATAACAGCTTGACGGGTCCAATTCCTATGTCATTGACTAATATTTCATCTCTCCAAGTCTTGGATTTATCAAATAACCATCTGTCTGGTGTGGTTCCTGATAATGGCTCCTTCTCGTTATTCACTCCAATCAGTTTTGCTAACAACTTGGGTTTATGTGGGCCAGTCACTGGGCATCCTTGTCCAGGATCTCCACCATTTTCTCCTCCTCCCCCTTTCGTACCACCACCCCCAATTTCTAACCCAGGGGATGGAAGTGCCACTGGGGCAATTGCTGGGGGAGTTGCTGCTGGTGCTGCCCTGTTATTTGCTTCGCCTGCAATTGCCTTTGCATGGTGGAGACGAAGGAAACCACAAGAGTTTTTCTTTGATGTGCCTGCTGAAGAGGATCCTGAAGTCCATCTGGGTCAGCTCAAGAAGTTTTCACTACGAGAACTGCAAGTTGCCACAGATAGTTTCAGCAATAAGAATATTCTTGGAAGGGGTGGATTTGGTAAGGTATACAAGGGACGCTTGGCAGATGGTTCATTGGTTGCTGTGAAAAGACTAAAAGAGGAGCGCACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAAATGATCAGCATGGCTGTGCATCGTAATCTTCTCCGTTTACGTGGGTTCTGTATGACACCTACTGAGAGGCTACTTGTTTATCCCTATATGGCAAATGGAAGCGTTGCATCATGCTTAAGAGAGTGTCCAACAAATCAACCGCCTCTAGATTGGCCAACAAGGAAGCAAATTGCTTTGGGATCTGCTAGGGGTCTATCATATTTGCATGATCATTGTGACCCAAAGATTATACATCGTGATGTTAAAGCTGCAAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGGTGACTTTGGGTTGGCAAAGCTTATGGATTACAAGGACACCCATGTTACAACTGCTGTACGGGGCACGATTGGGCACATAGCTCCCGAGTACTTGTCAACTGGGAAGTCTTCAGAGAAGACCGATGTTTTTGGGTATGGTATCATGCTTCTGGAGCTCATAACTGGACAAAGAGCTTTTGACCTTGCTCGGCTTGCAAATGATGACGATGTCATGTTGCTTGATTGGGTAAAAAGCCTTCTCAAAGACAAGAAGCTAGAAATGCTGGTTGATCCTGATCTACAGAAAAACTATGTAGAATCGGAGGTAGAACAACTCATCCAAGTTGCACTTCTCTGCACTCAAGGCTCGCCTATGGACCGACCTAAGATGTCAGAAGTGGTGAGAATGCTCGAAGGCGATGGCCTGGCGGAAAGATGGGACGAGTGGCAGAAGGTCGAAGTTCTTCGGCAGGAAGTGGAGCTGGCCCCTCATCCCAATTCGGATTGGATTGTTGACTCCACAGAGAATTTACATGCAGTTGATTTATCGGGTCCTAGGTACTGCTTTGTCGAGTTGCTATGTGTCATCTTGCGCAGTTTGACAAAGTGA 1923 0.4535 METKVWTSAIFRLVVIVYSVWLISANMEGDALHSLRTNLQDPSNVLSSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNSFSGPIPDSLGKLSKLRFLRLNNNSLTGPIPMSLTNISSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLGLCGPVTGHPCPGSPPFSPPPPFVPPPPISNPGDGSATGAIAGGVAAGAALLFASPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKKFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRECPTNQPPLDWPTRKQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKSLLKDKKLEMLVDPDLQKNYVESEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVDLSGPRYCFVELLCVILRSLTK 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2350 640 SUPERFAMILY L domain-like 29 190 - -
Lele07g2350 640 Gene3D Transferase(Phosphotransferase) domain 1 378 595 - -
Lele07g2350 640 ProSiteProfiles Protein kinase domain profile. 301 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2350 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Lele07g2350 640 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Lele07g2350 640 FunFam Somatic embryogenesis receptor-like kinase 1 378 595 - -
Lele07g2350 640 FunFam Somatic embryogenesis receptor kinase 1 270 377 - -
Lele07g2350 640 Gene3D Ribonuclease Inhibitor 24 211 IPR032675 -
Lele07g2350 640 Pfam Leucine Rich Repeat 165 182 IPR001611 GO:0005515
Lele07g2350 640 Pfam Protein kinase domain 302 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2350 640 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Lele07g2350 640 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Lele07g2350 640 SMART serkin_6 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2350 640 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Lele07g2350 640 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 586 - -
Lele07g2350 640 FunFam Somatic embryogenesis receptor kinase 1 24 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2350 Lele-ChrLele07 28570145 28575850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2350 1 624 Receptor kinase-like Gene Family AT1G71830 87.520 0.0 1037
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele07g2350 Pkinase 1e-44 CL0016