Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2327 ATGGCAAAGATTCAACAAGTCTCCTCTCTTTCACCTGATGGACAAGCCCTTCTTTCCCTTGTATCTTCAGCAGACCCTTTTGCAAAATCTTCCTCTTCTGTTCTCTCTTCATGGAACCCTTCAAACCAAACCCCTTGTTTATGGCATGGCGTTACTTGCTCCCCACAAGGTAGAGTCATTTCATTATCCATTCCAAACACTTTCCTTAACCTTTCCTCTTTGCCTTCCCATCTTTCTTCTTTATCATATCTGCAACTTCTCAATCTGTCTTCCACTAATGTGTCTGGCTCCATCCCACCTTCTTTTGGCCAACTCTGCCATCTTCGCCTCCTTGACATCTCTTCAAATTCTCTCGCTGGTTTCATTCCTGAAGAACTCGGAAAACTCTCTTCGCTGCAGTTCCTTTACTTGAACTCCAATGGATTGACTGGAAGGATTCCTCATCAACTTGCTAATCTTACTTCACTTCAAGTTTTCTGCCTTCAAGACAATCTCCTTAATGGGTCAATACCATCACAATTAGGCTCTTTAACTTCGCTACAAGAGTTTAGAATTGGGGGTAATCCGTATCTAAGTGGTTCAATTCCACCACAATTAGGACTACTCGCGAATCTCACTACATTTGGGGCTGCAGCCACTGGTCTTTCGGGTGTTATTCCCTCTACATTCGGGAACTTGATCAATCTCCAAACGCTAGCGCTTTATGATACAGAAATTTCTGGTTCTATACCACCGGAGATTGGCTTGTGTTCTGAGCTAACGAATCTGTATTTGCACATGAATAAGCTGACAGGTTCTATCCCACCTCAACTGGGTAAGTTGCAAGAGCTTACTAGCTTGCTTCTTTGGGGCAATGCCTTATCTGGGTCAATCCCTGCTGAGATTTCCAATTGTTCATCACTTGTTGTGTTTGATGCCTCTGCTAATGAACTTGTGGGTGAAATACCATATGATTTGGGAAAGCTGTTGGTTCTAGAACAGCTTCATCTATCAGACAATTCTCTCACAGGGAAAATACCATGGCAACTGAGCAACTGCACTAATCTTGCTACTCTTCAGCTTGACAAGAATCAGTTATCAGGTACTATTCCATGGCAAGTTGGGAGATTGAAGTATTTGCAGAGTTTTTTCTTGTGGGGTAATTCAGTGTCTGGAAAAATACCTGCCACTTTTGGTAACTGTACAGAACTTTATACACTTGACCTTTCAAGGAACAAGCTAACAGGTTCAATTCCAGACGAAATTTTTGGCTTGAAGAAGCTGAGTAAGCTTTTGCTTCTGGGAAATTCCTTATCTGGTGAATTACCACGAAGCGTTTCAAATTGTGAGTCTCTAGTGAGATTGAGGCTTGGAGAAAATCAGCTTTCAGGACATATTCCTAGAGAGATTGGCCAACTGCAGAATCTGGTGTTCCTCGACTTGTACATGAACCATTTCTCAGGAAGCTTGCCGGTGGAGATTGGGAACATCACAGTTCTTGAGCTTTTAGATGTTCATAATAATCACATTACTGGGGATATCCCATCTCGGATTGGGGAGCTTGTAAATTTAGAGCAGCTAGATTGCAGTAGAAACAGTTTGACAGGTGAAATTCCTTGGATCTTTGGAAACTTAAGCTATTTGAACAAGCTCATTCTCAACAATAATTTACTCACAGGGTCAATCCCAAAATCCATTAGAAATTTGCAGAAGCTAACTCTATTGGATTTGAGTTACAATAACTTCTCCGGTGACATCCCATCTGAGATTGGTTATGTTACAAGCTTAACCATCAGTTTGGACTTGAGCTCAAATGCATTTACAGGAGAAATCCCTGAGTCAATGAGTGGTTTGACACAGTTACAATCACTTGATCTTTCTCATAATTTGCTTTATGGAGGAATTAAGGTTCTTGGTTCCCTCACCAGTCTCACTTCCCTAAATATCTCCTACAACAACTTCTCAGGTCCTATCCCAGTAACCCCTTTCTTTAGAACCCTATCTTCAAATTCATATTTTGAGAATCCCCATCTTTGTGAATCCCTCGATGGGACCACATGTTCTAGTCTGCTTCAAAGAAATGATCTAAAATCTGCCAAAACCATAGCTATGATATTGGTAATTCTCGCCTCAGTTACCATAATTGTCATTGCATCTTGGATTTTGGTTACACGAAATCACAAGAATATGATGGAAAAATCTTTGGGGACATTAGCATCTGCTTCAGGAGCTGAGGATTTCTCATATCCTTGGACTTTCATCCCATTTCAAAAACTAAACTTCACAATAGATAATATCTTGGATTGCTTGAAGGATGAGAATGTGATTGGAAAGGGTTGCTCTGGCGTTGTATACAAGGCTGAAATGCCTAATGGGGAGTTGATAGCAGTAAAGAAGCTTTGGAAAGAAAACAAAGAGGAAGAAACTCTGGACTCTTTTGCTGCAGAAATTCAGATTCTTGGGCACATCCGGCATAGGAACATATTGAGGCTCCTAGGTTATTGTTCTAACAGAAGTGTTAAACTTCTTCTCTACAATTACATTCCAAATGGTAACCTAAGACAGGTGTTGCAAGGGAATAGGTACCTAGACTGGGAAACTAGGTACAAGATTGCGGTCGGTTCAGCTCAGGGTCTAGCATACCTTCATCATGACTGTTTACCAGCAATCCTTCACAGAGATGTTAAGTGCAATAATATACTTCTAGATTCCAAGTTTGAGGCATATCTGGCAGATTTTGGTCTTGCCAAGCTGATGAGTTCACCAAATTATCACCATGCAATGTCCAGAGTTGCTGGATCTTATGAGTATGGCTACACCATGAACATAACAGAGAAGAGTGATGTCTACAGTTATGGAGTGGTTTTGTTGGAGATACTGAGTGGGAGAAATGCTGTTGAGACCCATGTTGGTGATGGAGTACACATAGTTGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCAGTGTCAATTCTAGACACAAAGCTCCAAGGCCTACCTGATCAAATGGTTCAAGAGATGCTTCAAACTCTTGGAATTGCCATGTTTTGTGTGAACTCTTCGCCTGCCGAACGACCCACAATGAAGGAAGTGGTGGCTCTGTTAATGGAGGTGAAGAGCTCACTTGAGGAGGTGGGAAAGACCTCTCAGCCTCTAATAAAGCAGTCCTCAAATCAAAGTTAA 3168 0.4157 MAKIQQVSSLSPDGQALLSLVSSADPFAKSSSSVLSSWNPSNQTPCLWHGVTCSPQGRVISLSIPNTFLNLSSLPSHLSSLSYLQLLNLSSTNVSGSIPPSFGQLCHLRLLDISSNSLAGFIPEELGKLSSLQFLYLNSNGLTGRIPHQLANLTSLQVFCLQDNLLNGSIPSQLGSLTSLQEFRIGGNPYLSGSIPPQLGLLANLTTFGAAATGLSGVIPSTFGNLINLQTLALYDTEISGSIPPEIGLCSELTNLYLHMNKLTGSIPPQLGKLQELTSLLLWGNALSGSIPAEISNCSSLVVFDASANELVGEIPYDLGKLLVLEQLHLSDNSLTGKIPWQLSNCTNLATLQLDKNQLSGTIPWQVGRLKYLQSFFLWGNSVSGKIPATFGNCTELYTLDLSRNKLTGSIPDEIFGLKKLSKLLLLGNSLSGELPRSVSNCESLVRLRLGENQLSGHIPREIGQLQNLVFLDLYMNHFSGSLPVEIGNITVLELLDVHNNHITGDIPSRIGELVNLEQLDCSRNSLTGEIPWIFGNLSYLNKLILNNNLLTGSIPKSIRNLQKLTLLDLSYNNFSGDIPSEIGYVTSLTISLDLSSNAFTGEIPESMSGLTQLQSLDLSHNLLYGGIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSNSYFENPHLCESLDGTTCSSLLQRNDLKSAKTIAMILVILASVTIIVIASWILVTRNHKNMMEKSLGTLASASGAEDFSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKENKEEETLDSFAAEIQILGHIRHRNILRLLGYCSNRSVKLLLYNYIPNGNLRQVLQGNRYLDWETRYKIAVGSAQGLAYLHHDCLPAILHRDVKCNNILLDSKFEAYLADFGLAKLMSSPNYHHAMSRVAGSYEYGYTMNITEKSDVYSYGVVLLEILSGRNAVETHVGDGVHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSSLEEVGKTSQPLIKQSSNQS 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2327 1055 ProSitePatterns Serine/Threonine protein kinases active-site signature. 883 895 IPR008271 GO:0004672|GO:0006468
Lele07g2327 1055 Pfam Leucine rich repeat 373 431 IPR001611 GO:0005515
Lele07g2327 1055 Pfam Leucine rich repeat 83 142 IPR001611 GO:0005515
Lele07g2327 1055 ProSitePatterns Protein kinases ATP-binding region signature. 769 792 IPR017441 GO:0005524
Lele07g2327 1055 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 189 412 - -
Lele07g2327 1055 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 841 1048 - -
Lele07g2327 1055 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 10 173 - -
Lele07g2327 1055 PRINTS Leucine-rich repeat signature 397 410 - -
Lele07g2327 1055 PRINTS Leucine-rich repeat signature 611 624 - -
Lele07g2327 1055 SUPERFAMILY Protein kinase-like (PK-like) 747 1030 IPR011009 -
Lele07g2327 1055 SMART LRR_typ_2 562 586 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 394 418 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 322 346 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 105 128 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 490 514 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 274 298 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 129 152 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 442 466 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 226 250 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 611 638 IPR003591 -
Lele07g2327 1055 SMART LRR_typ_2 153 177 IPR003591 -
Lele07g2327 1055 Pfam Leucine rich repeat N-terminal domain 11 54 IPR013210 -
Lele07g2327 1055 Gene3D Transferase(Phosphotransferase) domain 1 841 1051 - -
Lele07g2327 1055 Pfam Leucine Rich Repeat 516 538 IPR001611 GO:0005515
Lele07g2327 1055 Pfam Leucine Rich Repeat 325 346 IPR001611 GO:0005515
Lele07g2327 1055 Gene3D Ribonuclease Inhibitor 7 70 IPR032675 -
Lele07g2327 1055 ProSiteProfiles Protein kinase domain profile. 763 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2327 1055 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 744 840 - -
Lele07g2327 1055 Gene3D Phosphorylase Kinase; domain 1 740 840 - -
Lele07g2327 1055 SUPERFAMILY L domain-like 36 384 - -
Lele07g2327 1055 SUPERFAMILY RNI-like 280 665 - -
Lele07g2327 1055 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 420 490 - -
Lele07g2327 1055 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 491 683 - -
Lele07g2327 1055 Gene3D Ribonuclease Inhibitor 422 682 IPR032675 -
Lele07g2327 1055 Gene3D Ribonuclease Inhibitor 208 421 IPR032675 -
Lele07g2327 1055 Gene3D Ribonuclease Inhibitor 71 207 IPR032675 -
Lele07g2327 1055 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 319 1030 - -
Lele07g2327 1055 SMART serkin_6 763 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2327 1055 Pfam Protein kinase domain 765 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2327 Lele-ChrLele07 28217829 28221611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2327 9 1034 Receptor kinase-like Gene Family AT5G56040 44.914 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele07g2327 Pkinase 2.8e-39 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2296 05 38018343 38022747 Lele07g2327 07 28217829 28221611 hybridization
Lele06g2213 06 28134092 28137907 Lele07g2327 07 28217829 28221611 hybridization