Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2306 ATGGGCTCTCACCAGGTTAAGCCATCTAGACCTGTGGAGAGGTTCGAATTAAAAAATAATTATGCCGGAGATGGTGAATTTTTTGCTCATAGAAGATCCACGGGGCAGAAATTTGATAGGACGGAGTATGGCCGGCAAATCCAGCGCGAGCCCAGTAAGCATAAGGTTGAATCTGGTACTGGCAATGATCAAAGACAGGATGGTGACGTTGCTGGTGCAGAAAGAGTTAGAGTTAAGGGGAAATTGAATAACAGAGAGGGAAAGAAGGATGCTGTGCGTAATCATTCGAAGGTGTCAAGGAAGTCTTTTGAAGATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAACGTTCCAAAGGAAGCATTGGATGGCGTGATTCCCAAGAGTGCTGAATCGTACATTATGATTAATAAGGTAGGGCAGGGAACTTATAGCAATGTTTATAAGGCTCGAGATCGAAACACTGGAGAATTAGTGGCCCTGAAGAAGGTGCGCCTTGACACATCAAAGCCTGAATGTATTAAATTCATGGCAAGAGAAATTATGATATTACGGAAGTTGGATCATCCCCATGTAGTAAAACTCAAAGGATTGGCTACTTCAAGAATGCATTATAGTCTTTATCTCGTTTTTGACTTCATGCAAACAGATTTGGCTAGAATAGTTTCTCGTCCTGAAGAGAGATTAACTGAACCACAGGTCAAGTCCTACATGCATCAACTGCTTTCAGGTCTGCAGCATTGCCATGACCGGGGCATTTTACATAGAGATATCAAAGGGTCAAACCTTTTGATTAATAAAAGCGGGATGCTTAAGATTGCAGATTTTGGGCTCGCCAATTATTATAATCTCAACCATAACCAGCCTCTCACAAGCAGGGTTGTGACACTATGGTACAGAGCTCCTGAGCTGTTGTTAGGTGCCACTGATTATGGAGTTGGTGTTGATTTATGGAGTGCTGGATGCCTCCTGGCAGAAATGTTTACAGGGGTTCCGATTATGCCTGGTAGAACAGAGGTGGAGCAACTTCATAGAATTTTTAGGCTATGTGGGACGCCATCAGAGGGTTATTGGAAAAAATTCAAAGCTTCTGGGACTTTTAAGCCTCCAAAGTCTTATAGACCCTGCCTTGTAGAGACTTTCAAAGATCTCCCTTCTTCTTCTTTGGGTCTATTATGTGCTCTGCTTGCCTTGGATCCTGCTTACCGTGGAACCGCATCTAAAGCTCTCCAAAATCAATTTTTCTATACAAGTCCTTTGGCATGTGACCTCTCTGGTCTTCCTGTGATCTGCAATGAAGAAGAAGAGCAAGATCAAGCAGATGAACAAATCAAGCGCATGAATTCTAAAATTAGACGCTCACGTACATTACTTGAGCGTCGTAGAAAGAACCTGTTATCTGAAAAGCCAGCAGAACCCACTATGTCTCCTAAAGAGGAATCAAGTAAGAATGCTGATACATACGTCCCACGTGAAGAACCGGGTAGCACAACCACAACCAGTAGTACCTTATCAAGTTTGAATCCTACTGACGAAAAGGATTCTTCACCTATCTTCTCTCCAGATGTGTCCTCACAGCAAAAGCTGCTCCTCAAAACCCATCGTGATGATAGTGGTGGTGAAAACATTGATAAGTTTCCTCTTTTACCTAAGTTGAAATCACGTGCAGCCGCCGGGGGAGAAGATACTATGTACAAATTTCGCCCCGTCCGCAGGTCTTCCACCAGAGATTTCAGTTTCTCAAAACAAAGGGACCGATTACTCCTTGAAACAGACGATCAGACTCAATAG 1797 0.4329 MGSHQVKPSRPVERFELKNNYAGDGEFFAHRRSTGQKFDRTEYGRQIQREPSKHKVESGTGNDQRQDGDVAGAERVRVKGKLNNREGKKDAVRNHSKVSRKSFEDEMVDGWPKWLVDNVPKEALDGVIPKSAESYIMINKVGQGTYSNVYKARDRNTGELVALKKVRLDTSKPECIKFMAREIMILRKLDHPHVVKLKGLATSRMHYSLYLVFDFMQTDLARIVSRPEERLTEPQVKSYMHQLLSGLQHCHDRGILHRDIKGSNLLINKSGMLKIADFGLANYYNLNHNQPLTSRVVTLWYRAPELLLGATDYGVGVDLWSAGCLLAEMFTGVPIMPGRTEVEQLHRIFRLCGTPSEGYWKKFKASGTFKPPKSYRPCLVETFKDLPSSSLGLLCALLALDPAYRGTASKALQNQFFYTSPLACDLSGLPVICNEEEEQDQADEQIKRMNSKIRRSRTLLERRRKNLLSEKPAEPTMSPKEESSKNADTYVPREEPGSTTTTSSTLSSLNPTDEKDSSPIFSPDVSSQQKLLLKTHRDDSGGENIDKFPLLPKLKSRAAAGGEDTMYKFRPVRRSSTRDFSFSKQRDRLLLETDDQTQ 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2306 598 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Lele07g2306 598 MobiDBLite consensus disorder prediction 574 598 - -
Lele07g2306 598 SUPERFAMILY Protein kinase-like (PK-like) 130 421 IPR011009 -
Lele07g2306 598 Pfam Protein kinase domain 137 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2306 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lele07g2306 598 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Lele07g2306 598 Gene3D Transferase(Phosphotransferase) domain 1 218 457 - -
Lele07g2306 598 MobiDBLite consensus disorder prediction 441 478 - -
Lele07g2306 598 Gene3D Phosphorylase Kinase; domain 1 125 217 - -
Lele07g2306 598 FunFam Putative serine/threonine-protein kinase 218 455 - -
Lele07g2306 598 MobiDBLite consensus disorder prediction 19 96 - -
Lele07g2306 598 MobiDBLite consensus disorder prediction 493 530 - -
Lele07g2306 598 ProSiteProfiles Protein kinase domain profile. 135 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2306 598 SMART serkin_6 135 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2306 598 MobiDBLite consensus disorder prediction 30 96 - -
Lele07g2306 598 MobiDBLite consensus disorder prediction 439 548 - -
Lele07g2306 598 PANTHER CELL DIVISION PROTEIN KINASE 133 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2306 Lele-ChrLele07 27652051 27656258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2306 130 459 Core Cell Cycle Gene Families AT5G10270 43.228 1.12e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele07g2306 Pkinase 7e-68 CL0016