Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2297 ATGGATCACATCTTCCAAGCCGTCATCGCCGCCGTCGCTAGCTTCTTTGTCGTCACCCTCATCTTCGCCGCCATCATCCTTGCCTGCAAAAGCAACACCACGACCCATCCCCCTCAGCGTCAAAACCGTGCGGGCACTCAGAATCGGACCCTTCCGGAGCTATCCTCCGTCGTCGTCGACGGTAGCTGGTCGTTCGACCCCTACGTTCAGATCACCTGGGACGAGATCACTAGAGCTACCAAGAACTTCTCGCCCGATCTCATCATCGGCGACGGTAGCTTCGGCCTCGTCTACAAAGCGCGTCTCTCCAATGACCTCGTCGTCGCCATCAAGAAGCTCTCGCCGGACGCATTCCAAGGATTTCGTGAATTCCGCGCCGAGATGGAAACTCTAACCAAGCTCCGGCATCCCAATATCGTCAAGATCCTCGGCTACTGGGCGGCGGGTCAGGAGAGAATGTTGGTCTACGAGTTCATCGAGAAAGGCAATCTCGATCAATGGCTTCACGATCCTACGATTTCATCGTCATATGGATACGACGACGTTTCAATGCCGCGGGTCCCACTGTCCTGGGAGCGGAGGTTGAAGATAATCAGAGGCGTAGCAAATGGGCTGTTTTACTTACATGGGCTGGAGAAGCCTATTATTCACAGAGACATTAAAGCCAGTAATATCTTGCTGCACTCGGACTTCGAGGCCCATATTGCTGATTTTGGGCTTGCGAGGAGGATCGATACGTCGAACACTCACGTGTCAACTCAGTTCGCCGGAACTATGGGGTATATGCCACCGGAGTACAGAGATGGGGTAAATGTGGCCAACGTGAAGGTTGATGTCTATAGTTTCGGGGTTTTGATGCTGGAGACCGTAACGGGCCGGCGGCCGAATCTGTCCGTGAAGGTTGAGAATAGGGATATTGGGCTCGTGCAATGGGCCAGGAAAATGACGGCCCATAACTCCCAAATGGAAATGGTTGATTCCAATATTTCAAGAGAAGGAATCAGTGAAGATAATGTGAAGGAGTACTTTAGGATTGCTTGTATGTGCACGAGTGAATTACAGAAAGACAGACCTGTGATGCAACAGGTAGTGGAACTGTTCGAGAAGATGGCCGCGTAA 1119 0.5201 MDHIFQAVIAAVASFFVVTLIFAAIILACKSNTTTHPPQRQNRAGTQNRTLPELSSVVVDGSWSFDPYVQITWDEITRATKNFSPDLIIGDGSFGLVYKARLSNDLVVAIKKLSPDAFQGFREFRAEMETLTKLRHPNIVKILGYWAAGQERMLVYEFIEKGNLDQWLHDPTISSSYGYDDVSMPRVPLSWERRLKIIRGVANGLFYLHGLEKPIIHRDIKASNILLHSDFEAHIADFGLARRIDTSNTHVSTQFAGTMGYMPPEYRDGVNVANVKVDVYSFGVLMLETVTGRRPNLSVKVENRDIGLVQWARKMTAHNSQMEMVDSNISREGISEDNVKEYFRIACMCTSELQKDRPVMQQVVELFEKMAA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2297 372 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Lele07g2297 372 FunFam Phytosulfokine receptor 2 45 158 - -
Lele07g2297 372 FunFam Phytosulfokine receptor 2 159 371 - -
Lele07g2297 372 Gene3D Transferase(Phosphotransferase) domain 1 159 371 - -
Lele07g2297 372 ProSiteProfiles Protein kinase domain profile. 83 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2297 372 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 369 - -
Lele07g2297 372 SUPERFAMILY Protein kinase-like (PK-like) 64 367 IPR011009 -
Lele07g2297 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lele07g2297 372 Pfam Protein tyrosine and serine/threonine kinase 89 366 IPR001245 GO:0004672|GO:0006468
Lele07g2297 372 SMART serkin_6 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2297 372 CDD STKc_IRAK 89 370 - -
Lele07g2297 372 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2297 Lele-ChrLele07 27474212 27475330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2297 67 370 Receptor kinase-like Gene Family AT5G07280 44.262 3.79e-72 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lele07g2297 PK_Tyr_Ser-Thr 1.8e-45 CL0016