Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2293 ATGGTTTCGGCGCTGACGCATGTGGTGTCAGGATCTGATGGTCAGGGACGCACCGAATGGATCCCTGTGACATCAACTGTTGGCCAGCCTTCTCCTTCTTCTACAGTTTTGTCGACATACTTGTCGTCTTCTTCTTCTTCATCATCATCTTCTTCGAATGCTTCAGGCTCTGTTTTAAGCTCTGCCTCTGGTTCTACCGCCTCCTGGGTTGGCCACAAACGAGCACGTGACCAACACAGCTCTGTATATGGATCTCTCAGTGACTTCAGATTTCTTTCTCAGGGACAATCATCTTCAGTGGCAGAGGAGGGGACGAATGTGGTGGCAAGTACGGTGGTGGATACGGTGGCAGCGACGGCTGAGAAAAGTGAAGAAAGGAGGAGGAGGTACAGAGGAGTAAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAAATTCGGGATCCTCACAAGGCGGCGAGAGTCTGGCTTGGTACATTCGACACAGCGGAGGCCGCCGCCAGAGCTTACGATGAAGCTGCATTGAGATTCCGAGGGAACAGAGCAAAATTGAATTTCCCTGAAAATGTCAGAGTTGTGCCCCCTGCTCACGATTTTCAGGCCACTCGCCTTGCGGTATCAGATTCTCCGGTGACTCATTTCCAACATCAGACTCCTAATCTTCCTCCTCCACCTCCTCCCCCACAGCAGCCGCCGTTCTCACAGTCACCGTCTTTTCAATCGCAATCAGATTTGATCAGAGACTACTGGGAATACTCTCAGCTTCTCCAGAGCAGCTCCGATGCATTCCAACAACAGCAACAACCTCAGCAACAGCAACAGCAACAACATTCAAATTTGCTGCAACAATGGATCTACAATTCCCAATTGGCGGCGCTTCAATCGTCTTCTTTGTTATTATCATCGTCGCCTCTTCCTTCTTCATCATCGCCAACAGCATTCTCACCTTCTAGCCAGCTATCCTCTGCTTCATATCCTCTGTTTTCCAGTCAGCAAACAGGATCCTTCCGACCAACACTCGGAAACCAACCGCGTGGTGGCGGTGGTGGCAACATCGGCGGCAGCGACGGCTCAGACTTTCCGGCATCAACTTGGTCAGATCCCGGGGGCTACCCTCCTCCATCCGGTTCAGGCTGA 1134 0.522 MVSALTHVVSGSDGQGRTEWIPVTSTVGQPSPSSTVLSTYLSSSSSSSSSSSNASGSVLSSASGSTASWVGHKRARDQHSSVYGSLSDFRFLSQGQSSSVAEEGTNVVASTVVDTVAATAEKSEERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRVVPPAHDFQATRLAVSDSPVTHFQHQTPNLPPPPPPPQQPPFSQSPSFQSQSDLIRDYWEYSQLLQSSSDAFQQQQQPQQQQQQQHSNLLQQWIYNSQLAALQSSSLLLSSSPLPSSSSPTAFSPSSQLSSASYPLFSSQQTGSFRPTLGNQPRGGGGGNIGGSDGSDFPASTWSDPGGYPPPSGSG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2293 377 MobiDBLite consensus disorder prediction 1 72 - -
Lele07g2293 377 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Lele07g2293 377 Gene3D AP2/ERF domain 128 188 IPR036955 GO:0003700|GO:0006355
Lele07g2293 377 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
Lele07g2293 377 FunFam Ethylene-responsive transcription factor 2 128 187 - -
Lele07g2293 377 SUPERFAMILY DNA-binding domain 129 187 IPR016177 GO:0003677
Lele07g2293 377 MobiDBLite consensus disorder prediction 299 377 - -
Lele07g2293 377 PANTHER DNA-BINDING DOMAIN 60 278 IPR044808 GO:0003700|GO:0009873
Lele07g2293 377 CDD AP2 137 188 IPR001471 GO:0003700|GO:0006355
Lele07g2293 377 MobiDBLite consensus disorder prediction 216 233 - -
Lele07g2293 377 MobiDBLite consensus disorder prediction 299 339 - -
Lele07g2293 377 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Lele07g2293 377 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Lele07g2293 377 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Lele07g2293 377 MobiDBLite consensus disorder prediction 1 68 - -
Lele07g2293 377 MobiDBLite consensus disorder prediction 207 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2293 Lele-ChrLele07 27371152 27372406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2293 121 193 AP2-EREBP Transcription Factor Family AT2G33710 79.452 1.65e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g2293 AP2 7.1e-15 CL0081