Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2290 ATGGTTTCACATGTAACGGCACTCCTAATAGCACTGCAATCTGTTGGAACTAATAGCACTGTCTCTGATAAGGGTTTTACATGTAACCGCACTCCTAATACCATTGAACAATTTAAAGATAGAATTGACACTTTGATAGTGGTTTCAACCCTTATAATAACAACATCATTCGCTGCTGGGTATACCGTACCAGGTGATGTAGATCAAGGCACTCCTGTCTTGCTAAATCGCCCTATGTTCCATTTATTCATTATCTCCCTTACAATTTCTGTGTTTGGTTCTATAAGTTCCACCATAATTCTCATATTGGCTCGACTAGGGGATCTCAATCTAGTGGCTTTTGCTCTTACTTGGGCAATACCTCTTCTAGGTCTGTCCTTAACAACACTATCTCTAGCATTTTTGGCAGTTCATTCACAACCGCAGAAGCATTATCAGGAGACGAGTAGGATGTCGCACAGGAAGTTCGAACACCCCAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAAGCTTACCGCCTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTGAGAGAGGTCGAGAAACCTGGGTCAAAACTTCACAAGAAGGAAACCTGTGAGCCTGTTACAATTATTGAGACACCTCCAATGGTTATTGTTGGAGTTGTGGGTTATGTGAAGACTCCTCGTGGCCTTCGGACATTGAGCACTGTATGGGCTCAGCATTTGAGTGAGGATGTGAAGCGTAGGTTCTATAAGAACTGGTGCAAATCAAAGAAGAAGGCTTTCTTGAAGTACTCCAAGCAGTATGAATCTGAAGAAGGCAAGAAAACCATTCAGGCTCAACTTGAGAAAATGAAGAAGTATGCATCAGTTGTGCGTGTTTTGGCTCACACCCAGATTAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGTACAATTGCACAGAAGGTGGACTATGCCTACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATTGATCTCATCGGTGTAACAAAGGGTAAAGGGTACGAAGGTGTTGTCACTCGTTGGGGTGTGACCCGTCTTCCCCGCAAGACTCACAGGGGTCTGAGGAAAGTTGCATGTATTGGTGCCTGGCATCCTGCTAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGAACAGAGTTGAACAAGAAGGTTTACAGGCTCGGCAAAGCTGGAGATGAGTCACACACAGCTATTACTGATTTTGACAGGACTGAGAAGGACATTACTCCAATGGGTGGCTTCCCTCACTACGGTATTGTGAAGGATGACTTTGTCATGATCAAGGGATGCTGTGTTGGTCCCAAGAAAAGGGTTATCACACTGCGCCAATCTCTTCTTAAGCAGACTTCTCGTGTTGCCTTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTCGGCCGTCTCAAGGCTTAA 1620 0.4562 MVSHVTALLIALQSVGTNSTVSDKGFTCNRTPNTIEQFKDRIDTLIVVSTLIITTSFAAGYTVPGDVDQGTPVLLNRPMFHLFIISLTISVFGSISSTIILILARLGDLNLVAFALTWAIPLLGLSLTTLSLAFLAVHSQPQKHYQETSRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLSTVWAQHLSEDVKRRFYKNWCKSKKKAFLKYSKQYESEEGKKTIQAQLEKMKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYRLGKAGDESHTAITDFDRTEKDITPMGGFPHYGIVKDDFVMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2290 539 SUPERFAMILY Translation proteins 154 520 IPR009000 -
Lele07g2290 539 FunFam 60S ribosomal protein L3 376 424 - -
Lele07g2290 539 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 151 534 IPR045077 GO:0003735|GO:0005840|GO:0006412
Lele07g2290 539 ProSitePatterns Ribosomal protein L3 signature. 362 385 IPR019926 -
Lele07g2290 539 Gene3D Ribosomal protein L3, domain 3 151 424 IPR044892 -
Lele07g2290 539 Gene3D Translation factors 194 535 - -
Lele07g2290 539 FunFam 60S ribosomal protein L3 194 286 - -
Lele07g2290 539 FunFam 60S ribosomal protein L3 151 224 - -
Lele07g2290 539 FunFam 60S ribosomal protein L3 233 357 - -
Lele07g2290 539 Pfam Ribosomal protein L3 151 520 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele07g2290 539 Pfam Domain of unknown function 36 138 IPR026961 -
Lele07g2290 539 FunFam Ribosomal protein L3 415 539 - -
Lele07g2290 539 Gene3D - 233 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2290 Lele-ChrLele07 27204035 27210766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2290 151 537 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 86.047 0.0 701