Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2254 ATGCCAGTAGCGAAACTTAAAGCTTCTAGCAGTCCAGATGTCATGAAAGCAGAGGCTTTAAATGATTCGTTAGATACCATAATCAGACAAGCAATTGGCAAAGAACCTTTCCTTTCTTTTTCAAGGGCTGGTGGCCGCCCTGTGCAGTGGATTCAATTACTCCAAGCTTTAGATCAACAAGAACTCCCAGGTTGGCCTGTGCTCACTCCTCTGAAGGTTCAATTGCAGAAGTGTGACAAGTGTTCCCAAGAATTTTGCTCTCAAATTAACTACAGAAGACATCTTCATGTGCAACATCGATTGAAAAAACTTGACAAGGATTCTACAAACAACAGGGATCTGTTAGGAGCATATTGGGATAAGCTTTCTCTAGAAGAGGCGAAGGAAGTTTTATCATTTAACAATGTGATGCTGGAGGAGGTTCCAGGGTCTACAATTTTAAAAGCTTTGGCAACCCTTATTCGAAAACAAGGATTTTCATCATTTCCACAATATTATTTGAAGGCTGGTTCTTCCCTTTTGGATATTGCTCAAGCTAGATACGGTTTTCCTATATCTTCACAGGAGTTGTTTGGTGTACTTGATGATGCCAGTGAAAAATCATTTTTATGTGGTAATGCATTTTCTATGCAGAAATATATTTTTGATGGAGAGGCTGGAAAGATTAGTCTTGAACCAAAAAACGTTGTTGCTTGCACAAGTTTCTTGCTAGAGCAGATATTGGTAAAAGCATGGCTTGCTGACAAGGATGTTGAAGCATTAAGATGGCAGAAGCTACTGGTGGAGGAAGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAAGAAACGCCAGAAAAAGCTTAGGCTTAGGCAAAAAGAACAGAGGGTGAGGGAGCAAAGACATGAAGATGAGGCAGAAGTTAAAGAGAATATTAGTAGCACTGTAGAGGCTGTATCACCAGCTGAAGCATCTTTGGATTCATCTGACTTTGAAGAACATAATGAAAATACATTTCAAAGACCAGACAACAAAGAAGTTTTAGATGGGAGGAATTCTCAGTCAAGCTATGATTGTGGCTGTGATCAGAACATTGAACGAAATATAGCACTAGGACATAATGATCGATGTGCAGTGGTTGCTCAGCGGCAGGCACTGGCGAAATCACAGTTGACTGTAGCCAACAGTCACCATACAAACCATTCTCAAATTTTGAAATTTGGAGTCATTAAGAGGCATGGAACCTGCCGCAACCAAAGGGCAGCTCCTATAGTAACTGGTAATAAAGTGTGGAGCCGAAAGCCAAAACCAGTAACTAATGGGATAATTTTAAAAGCCAGGCCACATAATGAACCAGACAAAGTTAAGAATCATGAACTATTGATAGGGTCTTTATCTGTTGCTCTTGATAATTGCAATAAATCAAAAACTGATTTAGTGGCACCTCAGGAGAACTGCATGTTCGAGAATCTGAACAAGGAGAGTAGTGCTCAGGAGAAGTCAGCTGTCCAGAATGGCAACAATCGGTTAGCAATTAAACTTTGGAGGCCTGTTAGCCGGCACGGATCAAAAGATGCAAATTCAGTTCAAAACGGTGGTAAAGAAGCTTATTCAATTACCAGAAAGGGGGATGATCCAAACTTATCAGATGAAAGTTGTTTAAGGTTGTGTGAAATAGATAATAGTATTAGTATTTTTGAGAAAAATTCTTCCCTCCAAGAGGACTGTGCAGGTCCCGGAAGCTCAAGACAACTATCCAGCAATGCTGCAAAAGCCTTTTTAGCACAAAGATGGAAAAAAGCCGTTTCGTTAAATCATGTGACATTGGTTCTTTAA 1821 0.4014 MPVAKLKASSSPDVMKAEALNDSLDTIIRQAIGKEPFLSFSRAGGRPVQWIQLLQALDQQELPGWPVLTPLKVQLQKCDKCSQEFCSQINYRRHLHVQHRLKKLDKDSTNNRDLLGAYWDKLSLEEAKEVLSFNNVMLEEVPGSTILKALATLIRKQGFSSFPQYYLKAGSSLLDIAQARYGFPISSQELFGVLDDASEKSFLCGNAFSMQKYIFDGEAGKISLEPKNVVACTSFLLEQILVKAWLADKDVEALRWQKLLVEEEEAAQKRQAEILEKKRQKKLRLRQKEQRVREQRHEDEAEVKENISSTVEAVSPAEASLDSSDFEEHNENTFQRPDNKEVLDGRNSQSSYDCGCDQNIERNIALGHNDRCAVVAQRQALAKSQLTVANSHHTNHSQILKFGVIKRHGTCRNQRAAPIVTGNKVWSRKPKPVTNGIILKARPHNEPDKVKNHELLIGSLSVALDNCNKSKTDLVAPQENCMFENLNKESSAQEKSAVQNGNNRLAIKLWRPVSRHGSKDANSVQNGGKEAYSITRKGDDPNLSDESCLRLCEIDNSISIFEKNSSLQEDCAGPGSSRQLSSNAAKAFLAQRWKKAVSLNHVTLVL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2254 606 MobiDBLite consensus disorder prediction 322 343 - -
Lele07g2254 606 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Lele07g2254 606 Coils Coil 260 298 - -
Lele07g2254 606 MobiDBLite consensus disorder prediction 287 306 - -
Lele07g2254 606 MobiDBLite consensus disorder prediction 286 346 - -
Lele07g2254 606 MobiDBLite consensus disorder prediction 516 542 - -
Lele07g2254 606 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2254 Lele-ChrLele07 18954340 18959003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2254 21 606 C2H2 Transcription Factor Family AT4G25610 42.429 9.48e-136 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele07g2254 None None None