Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2214 ATGGCTGATGACTGGGATCTCTCCGCCGTCGTGCGAGGTTGCAGATCCTCCTCCTCCACAGCCTCCGCCGCCACCAGCACCACTACAACTATTACAAAGCTGCCGTCTTCTTCATCCAAGGCCGTTTCTTTACCATTAACCAAGCAAGAAAATGACGTTTTCTCTTTTCCCAGTTTGATTCAACCCACAACCAATGGGTTCCAAGAACTTCACCAATTGTTCAGACCCTTTAACCCCACCACCACCATCACAACCACCACTATCTCCCCTAGTGGTTGTGGCATATATCCCGATTCCTCTTTTGCAGGTGCAGGGTCCAATAGTAATAATAATACTAATAATAATATAAATATAAATACAGCATCATCACGGGCTGCTTCTTCCTCTTCTCCTTTCGCATCCAATATGAGGCCTCATTTTATGCCACAAACCTCGCCCTCCACTTCTTCTTCTTCTTCTGGCTTTCAAAGATTCCATGACCAACATGTACAGCAACTCCAAAAAGAAGAGCAAATTCAACTTGTTCATCAGAAACAGCCATTTCAAACACTACCAGGTCAGATCGGCGGCGGCGGCGGCAGTAATTCTGGTATGACTTTACCAAATACGCAAGCTGCTCAAGCAACCAGATCCAGAAAAAGAAAGAGTCAACACAAAAGAATGGTTTGCCATGTGACGGCGGAAAATCTCACCACAGATTCGTGGGCCTGGAGAAAATACGGCCAAAAGCCTATAAAAGGTTCTCCATACCCAAGGAACTATTATAGATGTAGCAGTTCAAAAGGTTGTGGGGCCAGGAAGCAAGTAGAACGGAGCAATACTGAACCAGATATGTTCATCGTCACGTACACCGGAGAACACACACATTCGAGACCCACCCATCGGAACTCGCTCGCCGGAAGCACAAGGAACAAACCGTCGACGACGACGAGCCGTCAGCAACCCGCCTCTCGTGAATCTGCTTCACCAAGCAATACCGCAAACCGGGCATCGTCGTCTTCGCAGCTTTCTCCGACGACGCCTTTAAAGGCAGTGGCGGCAGCGAACGACGAGTGCGCCGATGAGCCCATGTTAAGCAATGAAGTCACTAGCCCTTTTCCTGAAGATGAGTTAGACTTCGCCTCTCATGATGACATTTTGATACCAAACATGGCGGCCATGATGGATAAGTTCTTGCTGGGTTCCGGTAAGCTTCAAGTTGCAATCGGACTTAGTGGCGGTGGGGGTAATAGCACAAGCGGCAATCCAGCGGACGGGTCGTATCCGAATACTGAACCCGCGTTGACTCCGAATCTACAACAATTCTCCCCTCTCAGTCGGTCTAGTCCTTGTTGA 1335 0.4861 MADDWDLSAVVRGCRSSSSTASAATSTTTTITKLPSSSSKAVSLPLTKQENDVFSFPSLIQPTTNGFQELHQLFRPFNPTTTITTTTISPSGCGIYPDSSFAGAGSNSNNNTNNNININTASSRAASSSSPFASNMRPHFMPQTSPSTSSSSSGFQRFHDQHVQQLQKEEQIQLVHQKQPFQTLPGQIGGGGGSNSGMTLPNTQAAQATRSRKRKSQHKRMVCHVTAENLTTDSWAWRKYGQKPIKGSPYPRNYYRCSSSKGCGARKQVERSNTEPDMFIVTYTGEHTHSRPTHRNSLAGSTRNKPSTTTSRQQPASRESASPSNTANRASSSSQLSPTTPLKAVAAANDECADEPMLSNEVTSPFPEDELDFASHDDILIPNMAAMMDKFLLGSGKLQVAIGLSGGGGNSTSGNPADGSYPNTEPALTPNLQQFSPLSRSSPC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2214 444 MobiDBLite consensus disorder prediction 125 166 - -
Lele07g2214 444 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 374 IPR044810 GO:0003700
Lele07g2214 444 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g2214 444 Gene3D WRKY domain 214 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g2214 444 MobiDBLite consensus disorder prediction 257 276 - -
Lele07g2214 444 ProSiteProfiles WRKY domain profile. 226 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g2214 444 MobiDBLite consensus disorder prediction 403 444 - -
Lele07g2214 444 MobiDBLite consensus disorder prediction 283 341 - -
Lele07g2214 444 FunFam WRKY transcription factor 22 214 285 - -
Lele07g2214 444 MobiDBLite consensus disorder prediction 182 210 - -
Lele07g2214 444 MobiDBLite consensus disorder prediction 405 444 - -
Lele07g2214 444 MobiDBLite consensus disorder prediction 294 341 - -
Lele07g2214 444 MobiDBLite consensus disorder prediction 182 220 - -
Lele07g2214 444 SMART WRKY_cls 231 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g2214 444 SUPERFAMILY WRKY DNA-binding domain 225 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2214 Lele-ChrLele07 16619885 16621502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2214 210 362 WRKY Transcription Factor Family AT5G52830 64.052 5.41e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele07g2214 WRKY 5.7e-26 CL0274