Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2191 ATGGTGGCGATCATGAGATTGAGAAGCTCAGAGAATGAGTGGCGGAAAGGCCCTTGGACTCATGAAGAAGATAAGTTGCTTACTGAATATGTCAACTGTCATGGTGAGAGAAACTGGAGTTCTGTATCAAGATTTTCAGGGTTGAATAGGAGCGGCAAAAGTAGTAGGTTGCGATGGGTGAACTATTTGAAACCTGGACTCAAGAAAGGCCCACTTACACCTCAAGAGGCAGGCATCATTATGGAACTGCATGCTGTGCTGGGTAACAAGTGGTCTACAATAGCTAAATACTTGCCTGGTAGAACAGACAATGAGATCAAGAACTATTGGAGAACCAACTTCAAGAAGAAAGGCCACAAGCTCTCTCACAATAAGAACCTTGAAAATCGAAGAGCAAATATGCTGCTAAGTAAACATCAAACAGCAGTGAGAGAGCAACAAACTCAAGAACATGATATGAAAGACATATTCTCTCATGTTTCTGATACAAAAAGTGATCAACCAAGTATGATCAAGACACCAGAAAACAAAAACCAAGAGATCATGAATTTAATTCAGGACCCAACTTTCGAAGATCAGTTTTACATGCCTTCGATGTACCAAGAGAAGTATTTTCCATCTTCATGGCCAGAAACTGATAAAGATGATAGCTTGTGGGTTAGTTTATGGAACCTGCTTGATGCATGA 687 0.4061 MVAIMRLRSSENEWRKGPWTHEEDKLLTEYVNCHGERNWSSVSRFSGLNRSGKSSRLRWVNYLKPGLKKGPLTPQEAGIIMELHAVLGNKWSTIAKYLPGRTDNEIKNYWRTNFKKKGHKLSHNKNLENRRANMLLSKHQTAVREQQTQEHDMKDIFSHVSDTKSDQPSMIKTPENKNQEIMNLIQDPTFEDQFYMPSMYQEKYFPSSWPETDKDDSLWVSLWNLLDA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2191 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lele07g2191 228 CDD SANT 73 114 IPR001005 -
Lele07g2191 228 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele07g2191 228 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 10 186 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele07g2191 228 CDD SANT 18 63 IPR001005 -
Lele07g2191 228 FunFam Myb transcription factor 16 68 - -
Lele07g2191 228 Gene3D - 71 155 - -
Lele07g2191 228 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lele07g2191 228 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Lele07g2191 228 SMART sant 68 116 IPR001005 -
Lele07g2191 228 SMART sant 15 65 IPR001005 -
Lele07g2191 228 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lele07g2191 228 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Lele07g2191 228 Gene3D - 16 68 - -
Lele07g2191 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2191 Lele-ChrLele07 16009597 16011507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2191 15 225 MYB Transcription Factor Family AT3G30210 47.945 3.96e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g2191 Myb_DNA-binding 5.2e-13 CL0123