Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2187 ATGGTTGGAGCTCAGACAACAGAGCAAGGTGACTGTTCCAAGGTCAAAGGCAATGTTCCTCATTGTTGCAAGAAGACCCCAACTGTGGTGGATCTCCTTCCTGGGGTCAGCGTCGGCCAAGGTGGCACTTCTAATAAGACTGTTAAGTTGCCTAAGAACTTCACTCTCCTGGCCCTGGTTATACTTGTGGCCCTGCTAAGGAGTGACTCCAAATTCCGTGGAGATAAAGGGCTTCACAATACAAAGAAAGACCATGACCAATTGTTACAGTGTACTCATCACATGTGCCCTATCAGAGTACATTGGCACGTGAAGCTCAACTATAAAGACTACTGGCGAGTGAAGATTGCTATAACAAATTTCAATTACAACATGAATTACACCCTTTGGACTCTTGCTGTTCAACATCCAAATCTCAGCAATGTCACTCAAGTCTTCAGCTTTGATTACAAGCCTCTTGTTCCCTATGAGTCTGTCAATGATACTGCTATGTTCTATGGCATGAAGTTTTACAATGATCTGTTAATGGAAGCTGGGCCATCTGGGAATGTTCAATCTGAGGTAGAAAAGATTTTAGTTCCTTGGGAAGGATTGGTCCAGAACCTTGCTTTTGAAGGTATCTGTATTCGAACGAACGTTTTTCTTGCATTGGTAATACGAACTGCTGGAGTTCTGTTTATGATGCTTACAAGCTGGAATCTCTATGTACAGCTAGACAAACCTAAATTTTATGTTGTTGGAGCTGGAATCTTTACAGGCATTACAGTGGCCCTCTACCCAGTTTCTGTTCTGAAAACAAGACTGCAGGTTGCTTCAAAGGATTCTGTAGAGAGAAATGCATTTTCTGTTTTAAAAGGATTGCTTAAATCAGATGGCTTTCCTGGTCTTTATAGAGGCTTTGGCACATTCATAACTGGTTCAGTTCCTGGCAGAATCATATTTATGACTGCCCTAGAGACCTCAAAGGTGGCTGCCATAAGAGTTCTTGAACCATTTAGACTATCTGAAACCACGCAGGCAGCCTTAGCAAATGGAGTTGCAGGCATGATATCATCATTTATAGCTCAAACAGTGTTTGTTCCAATTGATGTGGTTAGTCAAAAGATGATGGTTCAAGGATACTCAGGCCATGCTCGGTATAGTGGAGGTTTGGATGTTGTTCGCAACGTGTTAAGATCTGATGGCATTAGAGGATTGTATAGAGGGTTTGGTCTATCAGTTATGACTTATTCACCATCAGGTGCTGTATGGTGGGCAAGTTATGGTTCTAGCCAACAGTTCATTTGGAGATTTGTTGGATGTGGAACTGAACATGAGAAAGGCACTCCTAGTCTGCACAAATTAATGTTAGTTCAGGGTGCTGGGGGGGTTATTGCTGCTGCAACTGCATCCTGCATTACGGCCCCAGTGGATACTATTAAGACACGATTACAGGTGATGGGACATGAAAACAGAAGCAGTGTGAAAAAAGTTGTTAAGGATCTAATCAATGAGGATGGATGGAAGGGCTTTTATAGAGGATTAGGTCCAAGATTTGTCAGCATGTCAGCATGGGGTACTTCAATGATCTTGGCTTATGAATATTTGAGTAAGAAACTTTACCTTCTTGCCATATGCTAA 1620 0.4222 MVGAQTTEQGDCSKVKGNVPHCCKKTPTVVDLLPGVSVGQGGTSNKTVKLPKNFTLLALVILVALLRSDSKFRGDKGLHNTKKDHDQLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYNMNYTLWTLAVQHPNLSNVTQVFSFDYKPLVPYESVNDTAMFYGMKFYNDLLMEAGPSGNVQSEVEKILVPWEGLVQNLAFEGICIRTNVFLALVIRTAGVLFMMLTSWNLYVQLDKPKFYVVGAGIFTGITVALYPVSVLKTRLQVASKDSVERNAFSVLKGLLKSDGFPGLYRGFGTFITGSVPGRIIFMTALETSKVAAIRVLEPFRLSETTQAALANGVAGMISSFIAQTVFVPIDVVSQKMMVQGYSGHARYSGGLDVVRNVLRSDGIRGLYRGFGLSVMTYSPSGAVWWASYGSSQQFIWRFVGCGTEHEKGTPSLHKLMLVQGAGGVIAAATASCITAPVDTIKTRLQVMGHENRSSVKKVVKDLINEDGWKGFYRGLGPRFVSMSAWGTSMILAYEYLSKKLYLLAIC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2187 539 Gene3D Mitochondrial carrier domain 242 535 IPR023395 -
Lele07g2187 539 Pfam COBRA-like protein 1 36 IPR006918 GO:0010215|GO:0016020
Lele07g2187 539 ProSiteProfiles Solute carrier (Solcar) repeat profile. 339 427 IPR018108 -
Lele07g2187 539 Pfam Mitochondrial carrier protein 248 322 IPR018108 -
Lele07g2187 539 Pfam Mitochondrial carrier protein 341 428 IPR018108 -
Lele07g2187 539 Pfam Mitochondrial carrier protein 452 533 IPR018108 -
Lele07g2187 539 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 324 IPR018108 -
Lele07g2187 539 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 237 531 - -
Lele07g2187 539 SUPERFAMILY Mitochondrial carrier 239 529 IPR023395 -
Lele07g2187 539 ProSiteProfiles Solute carrier (Solcar) repeat profile. 447 532 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2187 Lele-ChrLele07 15887837 15898515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2187 226 531 Chloroplast and Mitochondria Gene Families AT5G15640 69.156 2.14e-154 442