LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g2164	ATGGATGAGGAGAAGCCGACAGAAGAAGTGCGGTACCGTGGGGTCCGGCGGCGGACTTGGGGGAAGTTTGCGGCGGAGATAAGAGACCCGACAAAGCAAGGAGCAAGGCTGTGGCTGGGGACATTTGAGACAGCTGAAGAGGAAGCAAGAGCTTATGACCAAGCAGCTTACAACTTTAGGGGTAATCTTGCAGTTCTTAATTTTCCCCAAGACTACAATCTTCCTCCTCCACCGCCATATCAACCATTCTTTTCTTCTTCCACTTCTTATTCTTCTCTTTCTTATGGAGCTTCTGGTGACACTGCAAGTTCAGCAACTTCTGGACAACACTTCCAAAGGGAAGTTATTGAGTTTGAGTGTTTGGATGATAAGGTATTGGAAGAGCTTCTCGAATCTCAAGAGAAGAAGAACAAATTTGATTGA	423	0.4634	MDEEKPTEEVRYRGVRRRTWGKFAAEIRDPTKQGARLWLGTFETAEEEARAYDQAAYNFRGNLAVLNFPQDYNLPPPPPYQPFFSSSTSYSSLSYGASGDTASSATSGQHFQREVIEFECLDDKVLEELLESQEKKNKFD	140

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g2164	140	ProSiteProfiles	AP2/ERF domain profile.	11	69	IPR001471	GO:0003700\|GO:0006355
	Lele07g2164	140	PANTHER	DNA-BINDING DOMAIN	6	134	IPR044808	GO:0003700\|GO:0009873
	Lele07g2164	140	MobiDBLite	consensus disorder prediction	88	108	-	-
	Lele07g2164	140	Gene3D	AP2/ERF domain	10	70	IPR036955	GO:0003700\|GO:0006355
	Lele07g2164	140	Pfam	AP2 domain	11	61	IPR001471	GO:0003700\|GO:0006355
	Lele07g2164	140	FunFam	Ethylene-responsive transcription factor 2	10	70	-	-
	Lele07g2164	140	PRINTS	Ethylene responsive element binding protein signature	12	23	IPR001471	GO:0003700\|GO:0006355
	Lele07g2164	140	PRINTS	Ethylene responsive element binding protein signature	35	51	IPR001471	GO:0003700\|GO:0006355
	Lele07g2164	140	SUPERFAMILY	DNA-binding domain	11	70	IPR016177	GO:0003677
	Lele07g2164	140	CDD	AP2	11	71	IPR001471	GO:0003700\|GO:0006355
	Lele07g2164	140	SMART	rav1_2	11	75	IPR001471	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g2164	Lele-ChrLele07	15379663	15380085	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g2164	8	136	AP2-EREBP Transcription Factor Family	AT3G23230	60.465	2.85e-44	140

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Lele07g2164		AP2	6.4e-12	CL0081