Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2080 ATGACTGCGAAGACAGAGATGGAATTTGCAGTTGAAGTAGAAGTACTTGGAAGTGTGAGGCATAAGAACCTGTTAGGTCTAAGAGGATTCTATGCAGGAGGAGAAGAAAGACTCATTGTTTACGATTACATGCCCAATCATAGCTTGCTCACTCATCTTCATGGCCAGCTCGCTCGAACTTGTCAGCTTGATTGGCCTAAAAGAATAAGCATCGCCATTGGAGCAGCTGAAGGCTTAGCCTTTGGGATTTTACTTTTGGAGATCGCAAGTGCGAAGAAACCGATAGAGAAGCTACCAGGAGGAGTGAAAAGGGACATAGTTAAGTGGGTAACACCATATGTTCAAAAGGGAATATTCAATCATATTGCTGACCCAAAGTTGAAGGGCAAGTTTGACAAGGAACAGTTGAAATCAGTGGTGATGTTGGCCATGAAGTGCACCGATAGTAGCCCGGAGAAGAGGCCGAGTATGGCGGAAGTGGTGGAGTGGCTCAAGGGCGGTGGCGGCAGTGTTGTTGGGCGGAGGCGAAAAGAGATTCCGGCAGCTCTGAGGGATGAAGAACACGACAAGAATGATAAGGACTATGAAGACATGGGAAAGAGGCAATCATCCATGTTGAGAATACCAAGCGATAGAAATAAAATAAGATGA 651 0.4578 MTAKTEMEFAVEVEVLGSVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLARTCQLDWPKRISIAIGAAEGLAFGILLLEIASAKKPIEKLPGGVKRDIVKWVTPYVQKGIFNHIADPKLKGKFDKEQLKSVVMLAMKCTDSSPEKRPSMAEVVEWLKGGGGSVVGRRRKEIPAALRDEEHDKNDKDYEDMGKRQSSMLRIPSDRNKIR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2080 216 Pfam Protein tyrosine and serine/threonine kinase 4 81 IPR001245 GO:0004672|GO:0006468
Lele07g2080 216 PANTHER OS01G0253100 PROTEIN 3 81 IPR045271 -
Lele07g2080 216 MobiDBLite consensus disorder prediction 177 201 - -
Lele07g2080 216 Gene3D Transferase(Phosphotransferase) domain 1 2 80 - -
Lele07g2080 216 Gene3D Transferase(Phosphotransferase) domain 1 81 170 - -
Lele07g2080 216 SMART tyrkin_6 1 164 IPR020635 GO:0004713|GO:0006468
Lele07g2080 216 MobiDBLite consensus disorder prediction 171 216 - -
Lele07g2080 216 SUPERFAMILY Protein kinase-like (PK-like) 5 164 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2080 Lele-ChrLele07 14061611 14063111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2080 4 180 Receptor kinase-like Gene Family AT3G59420 26.984 8.65e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele07g2080 PK_Tyr_Ser-Thr 7.6e-07 CL0016