Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2064 ATGGAAGAAAAGGATAGTTTTTTCTCAGGGCTCACCGTGAAGGCTAACGATGCTCCGGAAAGCCACCATATAACTCCGAGAAGTGAAAACTATGGGCTGTTTGGCGGGCCCACAGGAGCATCGCCAGCCCCAGCCCCGGCCCCTAAACCAGCTCCGACTACGGCTCCAACTTCATCTCCAGCTTTAGCTAGAGCTCCAGTGTCAGCTTCAGTTTCGGCGGCGGCGGCGACAGGGAGTACGGATGTAGTAAAGAAGAAAAGGGGAAGGCCTAGGAAGTACGGGCCTGATGGTAAATTAGCGTTGGCGTTGTCGCCGATGCCGATTTCATCTTCAATTCCGTTGACTGGAGACTACTCAATGTGGAAACGGGGTAGAGGGCGGCCAGTTGAATCGGTCAAGAAGTCGTCGTTTAAGTGCGATTTTGAAAGCCCTGGACCAGTAGGTGATGGGATTGCATACTCAGTTGGTGCCAATTTCACACCCCATGTGCTTACTGTTAATGCTGGCGAGGATGTTAATATGAAGGTCATGTCCTTCTCTCAACATGGATCTCGTGCTATTTGTATTCTTTCTGCAAATGGAACAATTTCAAATGTTACACTGCGTCAACCAACTTCTTCCGGGGGTACCTTAACATATGAGGGGCGATTTGAGATTCTTTCTTTGTCTGGTTCCTATATGCCTTCTGAGAACGGCGTGACAAGAAGTAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGTCCTGATGGTCGAGTCGTGGGAGGTGGCCTTGCTGGTCTGTTGGTAGCGGCAGGTCCTGTGCAGGTTGTTGTGGGGAGTTTTCTTCCAGGCCACCAGCAGATGCAGAAACCGAAGAAGCAAAAGGCGAATCATTTTTCGCCAGTGACATCTGGACACTATAATCCCATCCCAGTTGATGAAATAAAGATCAGTTTCGGAGGCGTAAAGCCTATTATGACTCCTGCTGCATTTCAAGCAGACAACAACACTGCTTCTTTTAACAACATCCCGGTCTCTAGCAACTCATCTGCTGGTGATGATGCTGATGCTGATGTTGACAATGATGATGATGTAACACTTTATCCTGAAAAGGACTCTAACCCTAGCCAAACAAATGCCGGAGTCGCATGCTAA 1134 0.4894 MEEKDSFFSGLTVKANDAPESHHITPRSENYGLFGGPTGASPAPAPAPKPAPTTAPTSSPALARAPVSASVSAAAATGSTDVVKKKRGRPRKYGPDGKLALALSPMPISSSIPLTGDYSMWKRGRGRPVESVKKSSFKCDFESPGPVGDGIAYSVGANFTPHVLTVNAGEDVNMKVMSFSQHGSRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPSENGVTRSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQMQKPKKQKANHFSPVTSGHYNPIPVDEIKISFGGVKPIMTPAAFQADNNTASFNNIPVSSNSSAGDDADADVDNDDDVTLYPEKDSNPSQTNAGVAC 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2064 377 SUPERFAMILY AF0104/ALDC/Ptd012-like 158 279 - -
Lele07g2064 377 Gene3D - 161 292 - -
Lele07g2064 377 ProSiteProfiles PPC domain profile profile. 156 295 IPR005175 -
Lele07g2064 377 MobiDBLite consensus disorder prediction 1 98 - -
Lele07g2064 377 FunFam AT-hook motif nuclear-localized protein 1-like 161 292 - -
Lele07g2064 377 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 50 343 IPR039605 GO:0003680
Lele07g2064 377 MobiDBLite consensus disorder prediction 363 377 - -
Lele07g2064 377 CDD DUF296 160 274 IPR005175 -
Lele07g2064 377 MobiDBLite consensus disorder prediction 335 377 - -
Lele07g2064 377 Pfam Plants and Prokaryotes Conserved (PCC) domain 161 274 IPR005175 -
Lele07g2064 377 MobiDBLite consensus disorder prediction 41 55 - -
Lele07g2064 377 SMART AT_hook_2 84 96 IPR017956 GO:0003677
Lele07g2064 377 SMART AT_hook_2 122 134 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2064 Lele-ChrLele07 13879618 13883466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2064 79 322 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 60.714 1.85e-89 273