Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2046 ATGGATGAATATCTCATTGCTTCCTCAGCTTCAGCTTTCTTTTTCTTCTTTAGCCCTAACTTCTCTACTGCACATATATATTATTCTCCTATTCCATATCCTGCTCAGGATATTGCGTCTGGCAAATCCTTCTGCAGTCTTCATCTTCTTCTCAAATCTCATTGCTACTCTCATTATCAACCACCTTGTTGCGACTTGTTCTTCGATCCGAGATCCTGCAGATTTCCGGTATTGGTGGTTCTCTTCTTTCTCATTTGCAATAATGAAATGAACTTGATGACACGTGGATCTGTTGAGGGTGATGAGGAATCAGCTTTACATATTGTTATATGTGGATCGATTAATGACGTCTATCTCATTGACTCCACCAGGGGCAATGCCAGCATGCCTGCCATGAAGAAGAATTCTGAGCAGCCTCGGTTAGGATTTGTATTCAGCAAGTTGGCGAATGAGATGGGAGATCCTGTTGATTTTGAACTTCCAGAATGGTTTAATAAGTGGAAGTCAGTGTCATATGTCTCTATAAAGCGCAATATATATGTTACAAAGAAGGTAAAGAGAAGGCTTGATGATGATGGCATATTCTGTTCCTGTACTCCTTCCCCTGGGTCTTCTAGTGTTTGTGGTAAATATTGCCACTGTGGGATGCTTATGTCTAGCTGCTCTTCAGGCTGTAAATGTGGGAGTTCTTGTCTCAATAAACCATTTCAGCATCGACCTACAAAAAAGATGAAATTGGTTCAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGGAAGGGGATTTTGTCATTGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGGCTTTGGAATATGAAACATCGTGGGGAGACAAACTTCTACTTATGCGAAATTAACAGAGATGTGGTGATTGATGCAACATACAAGGGGAACAAATCAAGATATATAAATCATAGTTGCTGCCCCAATACGGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACACGTGACATAAGGAAGGGCGAGCATCTTACTTATGATTATCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCCGCTGAGTGCAGGCGTAAGTTGGGGGTCCGACCTACCAAGCCTAAAACATCATCAGATGCTGCACTAAAATTAGTCGCATATAAGGTTTATCAGAATGGAGGTTTGCATATGGGACATTCTCATGCTATCGGTGTACCAAAGTACTCGCACAATTGCATTGGAGAAGTTGTTATGATAAATCACCCCACAAAAGAGAGGTGTTTTGGGATTATAAAGCGATTCGATAAATATTCCAAAAAACACACTATTATGTTTGAAGATGGTGATGTTGGTTCTATGGACTTGTCAGAAGTAGATTGGGAACTTTTGATGCAATTGTAG 1440 0.4021 MDEYLIASSASAFFFFFSPNFSTAHIYYSPIPYPAQDIASGKSFCSLHLLLKSHCYSHYQPPCCDLFFDPRSCRFPVLVVLFFLICNNEMNLMTRGSVEGDEESALHIVICGSINDVYLIDSTRGNASMPAMKKNSEQPRLGFVFSKLANEMGDPVDFELPEWFNKWKSVSYVSIKRNIYVTKKVKRRLDDDGIFCSCTPSPGSSSVCGKYCHCGMLMSSCSSGCKCGSSCLNKPFQHRPTKKMKLVQTEKCGSGIVADEDIKEGDFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDVVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIRKGEHLTYDYQFVQFGADQDCHCGAAECRRKLGVRPTKPKTSSDAALKLVAYKVYQNGGLHMGHSHAIGVPKYSHNCIGEVVMINHPTKERCFGIIKRFDKYSKKHTIMFEDGDVGSMDLSEVDWELLMQL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2046 479 PANTHER SET DOMAIN PROTEINS 156 396 - -
Lele07g2046 479 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 165 433 IPR025787 -
Lele07g2046 479 CDD SET_ASHR3-like 243 381 - -
Lele07g2046 479 Gene3D SET domain 162 398 IPR046341 -
Lele07g2046 479 SMART set_7 242 365 IPR001214 GO:0005515
Lele07g2046 479 SMART PostSET_3 365 381 IPR003616 -
Lele07g2046 479 SUPERFAMILY SET domain 167 377 IPR046341 -
Lele07g2046 479 ProSiteProfiles SET domain profile. 242 359 IPR001214 GO:0005515
Lele07g2046 479 FunFam Histone-lysine N-methyltransferase 158 397 - -
Lele07g2046 479 SMART shorttest3 191 241 IPR006560 GO:0005634|GO:0018024
Lele07g2046 479 Pfam SET domain 253 358 IPR001214 GO:0005515
Lele07g2046 479 ProSiteProfiles Post-SET domain profile. 365 381 IPR003616 -
Lele07g2046 479 ProSiteProfiles AWS domain profile. 191 240 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2046 Lele-ChrLele07 13718696 13725502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2046 215 377 C2H2 Transcription Factor Family AT2G23740 34.426 5.11e-22 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele07g2046 SET 2e-19 No_clan