Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2044 ATGAATAGTGCAGTTCAGTTCATTTATAAATATGCTGAACAAAGCTTCTTCTTCTTCTGTGATAATGGAAAATCTGATCATGGCGAGAGTGTTGTTGGTTATGATGAATGTGATAATGGGGGACCAGTGTATGACATACCAAAAGGAAGAAAGGATGGAAGGAGATCAAAGATAGAAGATACAATAAATCTGCCAGCCCCAACCTTCAATGCTTCCCAACTCATCAAGATGTTTTCCCAACATGGCTTTACTGCCCAAGAGATGGTTGCTCTCTCTGGAGCACATACACTCGGCGTGGCGAGGTGTTCATCATTCAAAAACAGACTGAACAAGGGAGATCCAACGTTGGGTGCAGAATTCGCTAAAACACTGTCTAAAACCTGCAACGCCGGAGACAACTCGGAGCAACCATTCGACTACACGAGGAACGACTTCGACAACCTCTACTACAACGCTCTGTTGAGGAATAATGGAGTTCTTACGTCAGACCAAACACTGGACAACAGCCCTGCAACTAGGAACTTCGTTAGTGGCTATGCGCTGAACCAGGCCATGTTCTTCTTTGATTTCCAACGGGCCATGGTCAAGATGAGTACCCTTGATGTCAAAGATGATTCCAAGGGAGAAGTACGAGAGAACTGTCGGATAATCAACTGA 657 0.446 MNSAVQFIYKYAEQSFFFFCDNGKSDHGESVVGYDECDNGGPVYDIPKGRKDGRRSKIEDTINLPAPTFNASQLIKMFSQHGFTAQEMVALSGAHTLGVARCSSFKNRLNKGDPTLGAEFAKTLSKTCNAGDNSEQPFDYTRNDFDNLYYNALLRNNGVLTSDQTLDNSPATRNFVSGYALNQAMFFFDFQRAMVKMSTLDVKDDSKGEVRENCRIIN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2044 218 Gene3D - 40 218 - -
Lele07g2044 218 ProSiteProfiles Plant heme peroxidase family profile. 29 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 FunFam Peroxidase 65 197 - -
Lele07g2044 218 PRINTS Plant peroxidase signature 40 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 PRINTS Plant peroxidase signature 86 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 PRINTS Plant peroxidase signature 192 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 PRINTS Plant peroxidase signature 152 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 ProSitePatterns Peroxidases proximal heme-ligand signature. 87 97 IPR019793 -
Lele07g2044 218 PRINTS Haem peroxidase superfamily signature 87 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 PRINTS Haem peroxidase superfamily signature 138 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 PRINTS Haem peroxidase superfamily signature 40 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 Gene3D Peroxidase, domain 2 65 197 - -
Lele07g2044 218 Pfam Peroxidase 40 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 PANTHER - 39 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele07g2044 218 SUPERFAMILY Heme-dependent peroxidases 40 218 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2044 Lele-ChrLele07 13707061 13711328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2044 40 218 Peroxidase AT4G33420 73.184 5.08e-89 265