Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2042 ATGGAGTCTAGAACTGTTCATATTGATGAAAAGAGGCCAAGCGGGGAGGAGCTTTATGGTCCAGAGAAGAAGAAGAAGAAGACGACAATTATAAGGTACAGAGAATGCATGAAGAACCATGCAGCTTCAATGGGAGGGAATGCAACAGATGGTTGTGGTGAGTTCATGGCTTCAGGAGAAGAAGGCACACCTGAATCTCTCAAGTGCTCAGCCTGCAAATGCCATAGAAACTTCCACAGAAAACACTTTGATGAATCTGATGAAGATTCTTATGATACCCCTAATTCTTCTCCATATTATGATTCTCGTCACCACCACCACCATCTTCTTAATCTTCCTTCTTCACAGACGATGCTTCCAAATAATGACGGTGCTGGTGATCATGATCACGCAGTGAAACCTTTATTGATCCATGATTTGTGTCTCGCAAGTTATAATAACAATTGTTCAGATCATGAGTCTGATGAAAAGAGGAAGAGGTTCAGGACTAAGTTCAGTGAAGAGCAGAAGGAGAAGATGCTGAGATTTGCAGAGAAGGTTGGGTGGAAAATGCAGAAAGTTGATGAATCCATGTGTTTTAGTGTTCGTGTGGAGTAG 597 0.4204 MESRTVHIDEKRPSGEELYGPEKKKKKTTIIRYRECMKNHAASMGGNATDGCGEFMASGEEGTPESLKCSACKCHRNFHRKHFDESDEDSYDTPNSSPYYDSRHHHHHLLNLPSSQTMLPNNDGAGDHDHAVKPLLIHDLCLASYNNNCSDHESDEKRKRFRTKFSEEQKEKMLRFAEKVGWKMQKVDESMCFSVRVE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2042 198 MobiDBLite consensus disorder prediction 1 24 - -
Lele07g2042 198 Gene3D - 143 198 - -
Lele07g2042 198 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 191 - -
Lele07g2042 198 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 33 82 IPR006456 -
Lele07g2042 198 SUPERFAMILY Homeodomain-like 150 192 IPR009057 -
Lele07g2042 198 Pfam ZF-HD protein dimerisation region 31 82 IPR006456 -
Lele07g2042 198 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 32 82 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2042 Lele-ChrLele07 13693008 13694183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2042 24 192 ZF-HD Transcription Factor Family AT2G02540 42.778 1.00e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele07g2042 ZF-HD_dimer 9.9e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g2042 07 13693008 13694183 Lele46g0342 46 2316553 2319522 CCT
Lele07g2042 07 13693008 13694183 Lele48g1137 48 16015042 16018391 CCT
Lele05g1996 05 14216127 14216807 Lele07g2042 07 13693008 13694183 hybridization
Lele06g1835 06 12892175 12892855 Lele07g2042 07 13693008 13694183 hybridization