Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2040 ATGAGCGGTGCACCTAAGAGACCTCATGAAGAGTCTGCTCATTCCTCATCAAAGCACCCACACGATGATTCAGGTTCATATTCTAAATTATCTTCATCTGTTTCAAATGAGTATCATGTTCCTTATGATTTAGGCCAGGATTCAAGGGTGACAAAGACACCCCGTATAGAATCTCGTGATGCAGACAGAAGATCTCCTCTCCACTCAGTGTATCGGATCCCATCTTCAACTGAGTTATATGCAGATCATCCTGTTAGTGCTGAAAACAGGATGGAATCAAGGGATTCCAAGGAAATTAGAGATCTACGGGTTGAGAACCGTGACGTAAAGACTGAGAAGAAGGAATTCCATGGTGAGGCAAGGAGGGATTCTCAGAGTTCTAAAAGTGATAAGGATCTACGTGTTGAAGGAAGAGGAGATGACACCAAGGATGTCAGGTATGATCGAGACAGTCATAATGATTCAAAAGGTGAAATTAAGACAGAAAAGGATGGTTATGGTGCAGTAAGTAGTAGCCACTTGAATTGGAAAGAATCTAAAGAATACCATCGGGGAAAAAGATATTCTGAATCCCCCAGTGGGAATTTGGATTCCTGGCATATGCCACGTGGAAATTCACAAGGCCCTCTTGAGGTTGGGAAGGAGGGTTCAACCGCAGAAGAGAGAGATTATATGGAAGCTCATGAGGCTGTTGGAGAGAACAAAGTTGATCCAAAAGGTGAAGATAAATTTAAGGAGAAAGATAGAAAAAGGAAGGATGTGAAGCATCGAGATTGTGGGGAGAGGGAAAAAGAAAGAAGTGAACGTAGAAGCAGCACGCCAGTAAATAATAGTGACAACAAAGAATCTGCCAAAGAAGATAGAGATGTTGAAAGATGGGATAGGGAGAGGAGAGATCTTCCTAAAGACAGGGAAAATTTAAAGGAGAAGGAAAAGGATCATGTTAAGAGGGAACCATGGAATGGAGTGGAGAAACAGGCTTCACATATTGAGGAGACTGGTGAGGCATCAGCTAAAATGACAGAGCATGAAAATGCTGCACCAGAGCAGAAGAAACAGAAAGATTTTGAAAGCTGGAAAAATGTTGATAGGGAGGCTAGAGAAAGGAGGAAAGAAAGGGAGAATGATTTAGAAGGAGATAGACCTGAGAAGCGTATTAGGTGCCCTGACAAGGAATCTGATGATGGATGTGCTGATGGAGAAGGAGCCACAGAGAAGGAAAGTGAAGTCTATAATTGTAGTGTTCAGCAACGTAAGAGGATGCAACGATCAAGGGGGAGTCCTCAGGTGGCTAATCGTGAACCTCGTTTTAGAACCCGTGCTCAGGACAATGAAGGGTCGCAAGGGAAAGTAGAAGTATCATCCGTTATTTATAAAGTTGGTGAATGCATGCAAGAACTGATTAAGTTGTGGAAGGAATTTGAATCTTCTCAAATGGAGAAAACTGGTGAAAGCACTAATAATGGTCCAACTCTTGAAATTCGGATACCAGCTGAGCATGTTACTGCTACTAACCGCCAAGTTAGAGGAGGCCAGCTATGGGGGACTGATTTGTACACATATGACTCAGATCTTGTTGCTGTTCTCATGCATACAGGTTACTGTCGACCAACGGCTTCTCCACCTCCTGCTGCAATACAAGAGCTGTGCACAGTCATTCGGGTGTTGCCTCCTCAGGATTGTTATATTTCTACCCTGAGAAACAATGTTCGCTCTCGTGCTTGGGGTGCTGCAATTGGTTGTAGTTATCGAGTTGAGCGGTGCTGCATTGTGAAGAAAGGAGGTGGAACTATTGATCTTGAACCTTGCCTTACACATACATCAACAGTTGAACCCACCCTTGCTCCATTGGCTGTTGAGCGGACAATGACCACTAGGGCTGCAGCTTCGAATGCATTGCGTCAGCAAAGATTTGTTCGAGAGGTCACCATACAGTACAACCTCTGCAATGAGCCTTGGATCAAGTACAGTATAAGCATTGTAGCTGACAAAGGTCTGAAGAAGTCTCTCTACACATCTGCTCGTTTGAAGAAGGGAGAAGTTATGTATTTGGAGACCCATTCGCTCAGATATGAGCTTTGCTTTACTGGAGAGAAAATGATTAAAACACCAGCATCACAATCACATGACGCAGGCATAGAAAAGTCTCAAAATCACCACTCTCATTCTGCAAATGGTGATAAATCTGATAGTGATAATGTCATGATTGATGTATTTCGATGGTCTCGTTGTAAGAAGCCTCTGCCACAGAAAGCAATGCGAACGATTGGGATCCCTCTGCCCCTTGAACATGTGGAGGTATTGGAGGAGAATTTGGACTGGGAAGATCTACAGTGGTCACAAACTGGTGTTTGGGTTGCAGGAAAGGAATATACCCTTGCACGTGTGCATTACTTGTCCATGCATTAG 2409 0.4359 MSGAPKRPHEESAHSSSKHPHDDSGSYSKLSSSVSNEYHVPYDLGQDSRVTKTPRIESRDADRRSPLHSVYRIPSSTELYADHPVSAENRMESRDSKEIRDLRVENRDVKTEKKEFHGEARRDSQSSKSDKDLRVEGRGDDTKDVRYDRDSHNDSKGEIKTEKDGYGAVSSSHLNWKESKEYHRGKRYSESPSGNLDSWHMPRGNSQGPLEVGKEGSTAEERDYMEAHEAVGENKVDPKGEDKFKEKDRKRKDVKHRDCGEREKERSERRSSTPVNNSDNKESAKEDRDVERWDRERRDLPKDRENLKEKEKDHVKREPWNGVEKQASHIEETGEASAKMTEHENAAPEQKKQKDFESWKNVDREARERRKERENDLEGDRPEKRIRCPDKESDDGCADGEGATEKESEVYNCSVQQRKRMQRSRGSPQVANREPRFRTRAQDNEGSQGKVEVSSVIYKVGECMQELIKLWKEFESSQMEKTGESTNNGPTLEIRIPAEHVTATNRQVRGGQLWGTDLYTYDSDLVAVLMHTGYCRPTASPPPAAIQELCTVIRVLPPQDCYISTLRNNVRSRAWGAAIGCSYRVERCCIVKKGGGTIDLEPCLTHTSTVEPTLAPLAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKSLYTSARLKKGEVMYLETHSLRYELCFTGEKMIKTPASQSHDAGIEKSQNHHSHSANGDKSDSDNVMIDVFRWSRCKKPLPQKAMRTIGIPLPLEHVEVLEENLDWEDLQWSQTGVWVAGKEYTLARVHYLSMH 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2040 802 MobiDBLite consensus disorder prediction 280 406 - -
Lele07g2040 802 MobiDBLite consensus disorder prediction 7 25 - -
Lele07g2040 802 Gene3D - 476 587 IPR036609 -
Lele07g2040 802 MobiDBLite consensus disorder prediction 215 272 - -
Lele07g2040 802 SUPERFAMILY LCCL domain 510 578 IPR036609 -
Lele07g2040 802 MobiDBLite consensus disorder prediction 176 190 - -
Lele07g2040 802 MobiDBLite consensus disorder prediction 409 429 - -
Lele07g2040 802 MobiDBLite consensus disorder prediction 713 727 - -
Lele07g2040 802 MobiDBLite consensus disorder prediction 1 448 - -
Lele07g2040 802 MobiDBLite consensus disorder prediction 705 731 - -
Lele07g2040 802 MobiDBLite consensus disorder prediction 50 67 - -
Lele07g2040 802 MobiDBLite consensus disorder prediction 85 163 - -
Lele07g2040 802 Pfam Histone deacetylation protein Rxt3 493 535 IPR013951 GO:0016575
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2040 Lele-ChrLele07 13654657 13662914 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1091 47 16583877 16594594 Lele07g2040 07 13654657 13662914 CCT
Lele48g1153 48 16150300 16153909 Lele07g2040 07 13654657 13662914 CCT
Lele45g0297 45 2384533 2397818 Lele07g2040 07 13654657 13662914 CCT
Lele46g0325 46 2182626 2192762 Lele07g2040 07 13654657 13662914 CCT
Lele05g1994 05 14185562 14194101 Lele07g2040 07 13654657 13662914 hybridization
Lele06g1831 06 12854514 12862562 Lele07g2040 07 13654657 13662914 hybridization