Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2039 ATGAAAACAAAAATAAGCAGATCGGGAAGGAAACGTATAGAGAAAGGGGAGGAAGATGACAAAGAGAAGAAGGCCGGAGTTGCCCCTGAGAAGATCATTGATTGGGGTATAGAAGAAGGTGGCGTGCTTGCTTTGACTTACCAGACTGACGATCCAATAGCAAGTTTTCAGGTGGTCTTTCGGATTCTGCAGAAGCGGATTTCCTTACACGCAGTTGTTAATAAGATGGAGAATGAAAATTATGTGAATCGTGGCGATGATGTGAATGACATAGAAAACGAAGGTCCATTGGATGGGAAGGACAATGGGAGATACCGGTCAGAGTTTTCTGAAAGAAACATGACATACACAGAGCCACTTCTGGTGAAGAGGACTAACACCACCTCGCAGATTGCCATAGTTGGGGCCAACCTTAGCCCCATTGAAAGCCTTGATTATGAGATTTTTGAGAATGAAATGTTTAAGCAGGACTGGAGATCAAGGAGCAAGATTCAGATATTCCAGTATGTGATACTTAAGTGGGGATTTGCTGCTCTTATTGGATTAGGCACTGGGCTACTTGGCTTCCTCAATAACATTGCTGTTGAGAATATAGCTGGTTTCAAGCTGCTTCTGGTAACCAACCTCATGTCTGCACACAGATATATTCTAGCATTTGTGGCATTAGCTGGTTGCAATATAGGTTTAGCAGCGGCAGCTGGATCTCTTTGTGCTTTCATTGCTCCAGCAGCAGCAGGCTCTGGAATTCCTGAGGTGAAAGCATATCTCAATGGTATTGATGCTCACAATATACTGGCTCCGACCACTCTTTTTGTGAAGGTTTTTGGTGCCATCCTTGGAGTTTCTGCGGGATTTGTGGTGGGCAAAGAGGGGCCTATGGTACACACAGGTGCATGCATTGCTTCCTTGTTAGGACAGGGTGGATCCCGCAAGTATCGCTTAACTTGGACCTGGCTAAGGTATTTTAAAAATGATCGGGACCGGCGAGACATGATTACTTGTGGTGCTGCAGCTGGTGTTGCTGCTGCATTTCGTGCTCCTGTGGGTGGTGTTCTCTTTGCCCTTGAAGAGGCTGCTTCATGGTGGCGGAGTGCTCTCCTTTGGAGGACATTTTTCACTACAGCAGTAGTTGCTATTGTTTTGAGAGCTGGAATTCAGTACTGTGCCACAGGAAAATGTGGGCTATTTGGGGAAGGTGGTTTGATAATGTACGATGTCAGTGCAGCCAAAGTATCATATACTGGTGCTGATATACTAGCAGTATTACTCTTAGGAACACTCGGAGGCATTCTTGGAAGCATATATAATTACTTTGTGGATAAGGTTGTTCGTACATATAGCATCATGAATGAAAAAGGACCTGGTTTCAAAATTCTCATTGTTGTCGCAATTGCTCTTTTGACATCATGTTGTGCTTATGGCCTACCATGGTTAGCAACGTGCATCCCCTGTCCTGATGATCCGAATGTGAGCTGTCCCACTGTTGATGAGTCTGGCAACTACAAGAACTTTCGATGTCAACCGGGATATTACAATGATCTTGCTTCACTTTTTCTAAACACCAATGATGATGCTATTCGCAACCTACTTAGCACCAGCACTTTCAAAGAATTCCACATCTCCAGTCTCTTTATCTTCTTCGTAACTATTTACTTTCTTGGGGTAGTCACATATGGTATTGCTATTCCATCTGGGCTTTTCATTCCTGTGATATTGGCGGGTGCTGCATATGGTCGGCTTGTAGGAAGACTATTTGAGTCAATTTCAAAACTTGATACTGGATTATACGCTCTCCTTGGAGCTGCCTCCTTCCTTGGTGGTACCATGAGAATGACGGTATCCCTTTGTGTTATATTGCTGGAACTCACCAATGATCTCTTGTTACTTCCTCTTGTGATGTTGGTCTTGTTAATCTCAAAAACTGTGGCTGATAGCTTCAACAAGGGTGTCTACGATCAAATACTGAATATCAAAGGACTTCCATATATGGAGGCCCATGCTGAGCCTTATATGAGGAATTTAGTGGCACGAGATGTGGTCTCTGGCCCACTAGTCACTTTCTCTGGCATTGAAAAGGTAAGGAATATACTAGATGCTCTGAAAACCACAGGGCATAATGGGTTTCCTGTCATCGATGAACCTCCATTCTCAGATGCACCGGAATTGTGTGGGCTTGTTCTTAGGTCTCATCTGCTAGTGCTATTGAAGGGGAAGAACTTCTCAAAAGAGAGGGTTCTTACAAGTCGAAACATCTTACAAAGAGTTTCTGCATTAGATTTTGCAAAGGTAGGATCAGGGAAAGGAATCAAACTAGAGGATCTAGATATTGAAGAGGAAGAGATGGATATGCATGTTGATCTCCACCCCATTGCCAATGCATCCCCATACACGGTGGTTGAGACCATGTCACTCGCTAAAGCCGCTATTCTTTTCCGCCAACTTGGTCTTAGGCACATGTGTGTGGTCCCGAAGAGTCAAGGGAGACCTCCAGTTGTTGGGATTCTGACACGCCATGACTTCATGGAGGAGCATGTCCATGGACTTTACCCTAATATGAAACCTCACAGGTGGACTGAGAAAATTTCCCCACCTTGTGAAGCCGACGTGCCAATGAATTTTGGGGAGGACGATGCATCTTCGGGCTCTGGGGATGATGGGCATATGTTAGATGGACACAAGCGTCAGGCTGGTGTGCCATCAAGTTCTGGTCGTCGGAAGAGAAGTCGCAAAGCTACTGGGGATGCTATAGTGGATGCCATGCTGGAAATAGCAGCTGTTTCAAAGATGAGAGCAAATGCAATAATGAAGAATGAGGACCGGTTCTCTATTAGCAAATGCATCAAAGTATTGGACGAGATGCAAGATACATCAACCAGCATGGATGACGTTGACTTAGAATTGAATGAGATGGAGCTAGTTGCAGCAGCTGCTGGCTACTATTACTATAACTGTATGACCAAACAACCTTGCCGTAGTTTATCACCTAGAAGATGTGGATTTATGACTGAAATGCTGAATGGGCATGATGACTTCAGTCGGGAAATGTTGCGGATGGACAAGCATGTTTTTCACAAGTTGTGTGGCATTCTTCGACAAAGATCCTTGTTGCGTGATACTGCTGGTGTAATGATAGAGGAGCAGTTGACAATATTCTTAAACATCATTGGTCATAATGAACGCAATAGAGTGATTCAAGAGCGGTTTCAGCACTCTGGTGAAACCATTAGCCGGCATTTTAACAATGTGTTGAAGGCTATAAAGTCCCTATCACGGGAATTCTTGCGACCTCATGACACCACCACATCTCCAGAAATTCTCAGTAGCAATAGATTCTACCCATATTTCAAGGATTGTATTGGAGTAATTGATGGCATGCATATTCCTGCACATGTCCCGGCCAAAGATCAATCTCGATTTCGTAATAAGAAAGGTTTACTATCTCAAAATGTGCTGGCAGCTTGCACATTTGACCTACAATTCATATTCATTTATCCTGGTTGGGAAGGATCTGTTACTGATTCACGCGTGTTAAGGGCAGTTCTTGATGACCCAGATCAGAATTTCCCCCAAATTCCTGAAGGAAAATATTACCTTGTTGATATGGAATACTCTAATATGGGAGGGTTTATCGCTCCTTTTCAAGGGGTTCGGTACCATCATTACGAGTACAGAGGTGCTAATCAATTACCCAGAAATGCAAAGGAGCTATTCAATCACAGGCACTGTTGTCTGAGAAACGCCATAGCAAGGTCATTTAATGTGTTAAAAACCAGATTTCCTATTCTCAAGCTTGCTCCCCAGTATTCTTTTCATGTTCAGAGGGACATTGTGATAGCTGCATGTGTCCTTCATAATTTCATCCGCCAGCAGGAAAGAAATGATTGGTTGTTTAGAACCGTTGGAGAAGTACCGGTTGATGAGATCTCAGATGTTGATGAACTTCCTGGTGTTCAGTTGATTTCTTCAATGGAAGAACAACATGCTTTCTCTTTAAGGGATTCAATTGCTGCAGCCATGTGGGATGACTTCTTGAATAAATGGAATGAGTGGTGA 4053 0.4365 MKTKISRSGRKRIEKGEEDDKEKKAGVAPEKIIDWGIEEGGVLALTYQTDDPIASFQVVFRILQKRISLHAVVNKMENENYVNRGDDVNDIENEGPLDGKDNGRYRSEFSERNMTYTEPLLVKRTNTTSQIAIVGANLSPIESLDYEIFENEMFKQDWRSRSKIQIFQYVILKWGFAALIGLGTGLLGFLNNIAVENIAGFKLLLVTNLMSAHRYILAFVALAGCNIGLAAAAGSLCAFIAPAAAGSGIPEVKAYLNGIDAHNILAPTTLFVKVFGAILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYRLTWTWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRAGIQYCATGKCGLFGEGGLIMYDVSAAKVSYTGADILAVLLLGTLGGILGSIYNYFVDKVVRTYSIMNEKGPGFKILIVVAIALLTSCCAYGLPWLATCIPCPDDPNVSCPTVDESGNYKNFRCQPGYYNDLASLFLNTNDDAIRNLLSTSTFKEFHISSLFIFFVTIYFLGVVTYGIAIPSGLFIPVILAGAAYGRLVGRLFESISKLDTGLYALLGAASFLGGTMRMTVSLCVILLELTNDLLLLPLVMLVLLISKTVADSFNKGVYDQILNIKGLPYMEAHAEPYMRNLVARDVVSGPLVTFSGIEKVRNILDALKTTGHNGFPVIDEPPFSDAPELCGLVLRSHLLVLLKGKNFSKERVLTSRNILQRVSALDFAKVGSGKGIKLEDLDIEEEEMDMHVDLHPIANASPYTVVETMSLAKAAILFRQLGLRHMCVVPKSQGRPPVVGILTRHDFMEEHVHGLYPNMKPHRWTEKISPPCEADVPMNFGEDDASSGSGDDGHMLDGHKRQAGVPSSSGRRKRSRKATGDAIVDAMLEIAAVSKMRANAIMKNEDRFSISKCIKVLDEMQDTSTSMDDVDLELNEMELVAAAAGYYYYNCMTKQPCRSLSPRRCGFMTEMLNGHDDFSREMLRMDKHVFHKLCGILRQRSLLRDTAGVMIEEQLTIFLNIIGHNERNRVIQERFQHSGETISRHFNNVLKAIKSLSREFLRPHDTTTSPEILSSNRFYPYFKDCIGVIDGMHIPAHVPAKDQSRFRNKKGLLSQNVLAACTFDLQFIFIYPGWEGSVTDSRVLRAVLDDPDQNFPQIPEGKYYLVDMEYSNMGGFIAPFQGVRYHHYEYRGANQLPRNAKELFNHRHCCLRNAIARSFNVLKTRFPILKLAPQYSFHVQRDIVIAACVLHNFIRQQERNDWLFRTVGEVPVDEISDVDELPGVQLISSMEEQHAFSLRDSIAAAMWDDFLNKWNEW 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2039 1350 MobiDBLite consensus disorder prediction 10 25 - -
Lele07g2039 1350 Gene3D - 664 847 IPR046342 -
Lele07g2039 1350 SUPERFAMILY Clc chloride channel 151 665 IPR014743 -
Lele07g2039 1350 Pfam Voltage gated chloride channel 230 644 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele07g2039 1350 CDD CBS_pair_voltage-gated_CLC_euk_bac 676 843 - -
Lele07g2039 1350 MobiDBLite consensus disorder prediction 1 25 - -
Lele07g2039 1350 PRINTS Chloride channel signature 242 259 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele07g2039 1350 PRINTS Chloride channel signature 594 610 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele07g2039 1350 PRINTS Chloride channel signature 650 664 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele07g2039 1350 PRINTS Chloride channel signature 562 582 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele07g2039 1350 PRINTS Chloride channel signature 612 631 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele07g2039 1350 PRINTS Chloride channel signature 273 292 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele07g2039 1350 PRINTS Chloride channel signature 337 356 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele07g2039 1350 Pfam CBS domain 793 842 IPR000644 -
Lele07g2039 1350 Pfam DDE superfamily endonuclease 1122 1285 IPR027806 -
Lele07g2039 1350 ProSiteProfiles CBS domain profile. 791 851 IPR000644 -
Lele07g2039 1350 SMART cbs_1 794 845 IPR000644 -
Lele07g2039 1350 SMART cbs_1 683 736 IPR000644 -
Lele07g2039 1350 MobiDBLite consensus disorder prediction 84 104 - -
Lele07g2039 1350 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 103 846 - -
Lele07g2039 1350 FunFam Chloride channel ClC3 165 482 - -
Lele07g2039 1350 SUPERFAMILY CBS-domain pair 667 843 IPR046342 -
Lele07g2039 1350 Gene3D Clc chloride channel 165 663 - -
Lele07g2039 1350 MobiDBLite consensus disorder prediction 866 912 - -
Lele07g2039 1350 PRINTS Plant CLC chloride channel signature 390 397 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele07g2039 1350 PRINTS Plant CLC chloride channel signature 147 155 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele07g2039 1350 PRINTS Plant CLC chloride channel signature 372 382 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele07g2039 1350 PRINTS Plant CLC chloride channel signature 514 530 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele07g2039 1350 PRINTS Plant CLC chloride channel signature 358 366 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2039 Lele-ChrLele07 13636523 13652141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2039 87 856 Ion Channels AT5G49890 71.632 0.0 1105