Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2037 ATGTGCAAGGGACGCAAACGGGCCCTAAAGAGAAATGGCTCCGGTGACCTTTACTTCGCCGCTTCTGTTGCCTGCTCTCTCGTGCTTACTCCTCGACGTTGCTCTTGAATTTCAGCTCATTGTCTTCAAGTGTTTTACTTGGGTCACAAGCTTTCTATCCTCTCAAACATGGCTACCAGACTTATGTTTGAGAACTCTTGTGAAGTTGGAGTGTTCTCTAAACTTACCAATGCCTATTGTTTGGTTGCCATCGGAGGTTCTGAAAGCTTCTACAGTGTATTTGAGTCTGAATTAGCAGGTGTTATCCCTGTGGTGAAGACCTCCATTGCTGGCACTCGTATTATTGGCCGCCTTTGTGCTGGAAACAAAAATGGGCTTCTCTTACCACACAATACCACAGACCAAGAACTTCAACATTTGAGGAACAGTCTACCAGATCAAGTTGTTGTTCAGCGCGTAGAAGAAAGATTATCTGCTCTCGGAAATTGTATAGCGTGTAATGACCATGTGGCACTCGCGCACACTGATCTTGACAGGGAAACTGAAGAGCTGATTTCAGACGTACTGGGACTAGAAGTTTTCAGGCAGACCATTGCCGGAAATATTCTTGTCGGAAGTTTCTGCGCCTTCTCCAACAGAGGCGGTTTGGTTCACCCTCACACTTCTATCGAAGACTTGGATGAGCTCTCAACACTTCTTCAGGTTCCTTTGGTTGCTGGGACTGTGAATCGTGGCAGTGAGGTCATAGCTGCTGGCATGACTGTTAATGACTGGACTGCCTTCTGTGGATCAGACACAACAGCAACAGAACTCTCTGTGGTTGAGAGTGTTTTCAAGCTTAGGGAAGCTCAACCTAGTGCTATTGTGGACGAGATGAGGAGATCGCTTATTGATAGCTACGTTTAA 906 0.4625 MCKGRKRALKRNGSGDLYFAASVACSLVLTPRRCSXISAHCLQVFYLGHKLSILSNMATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSVFESELAGVIPVVKTSIAGTRIIGRLCAGNKNGLLLPHNTTDQELQHLRNSLPDQVVVQRVEERLSALGNCIACNDHVALAHTDLDRETEELISDVLGLEVFRQTIAGNILVGSFCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVVESVFKLREAQPSAIVDEMRRSLIDSYV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2037 301 SUPERFAMILY Pentein 57 280 - -
Lele07g2037 301 FunFam Eukaryotic translation initiation factor 6 57 281 - -
Lele07g2037 301 Gene3D - 57 281 - -
Lele07g2037 301 CDD IF6 58 279 IPR002769 GO:0042256|GO:0043022
Lele07g2037 301 SMART eIF6neu2 59 260 IPR002769 GO:0042256|GO:0043022
Lele07g2037 301 Hamap Translation initiation factor 6 [eif6]. 46 301 IPR002769 GO:0042256|GO:0043022
Lele07g2037 301 Pfam eIF-6 family 60 259 IPR002769 GO:0042256|GO:0043022
Lele07g2037 301 TIGRFAM eIF-6: putative translation initiation factor eIF-6 60 280 IPR002769 GO:0042256|GO:0043022
Lele07g2037 301 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 57 300 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2037 Lele-ChrLele07 13622866 13627718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2037 57 301 Eukaryotic Initiation Factors Gene Family AT3G55620 88.163 3.15e-167 462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1634 14 23930618 23937111 Lele07g2037 07 13622866 13627718 CCT
Lele15g0722 15 4171883 4179143 Lele07g2037 07 13622866 13627718 CCT
Lele16g0729 16 4111822 4119496 Lele07g2037 07 13622866 13627718 CCT
Lele07g2037 07 13622866 13627718 Lele08g1827 08 12662664 12665889 ECH
Lele07g2037 07 13622866 13627718 Lele07g2037 07 13622866 13627718 ECH
Lele05g1988 05 14150661 14154725 Lele07g2037 07 13622866 13627718 hybridization
Lele06g1822 06 12786972 12790175 Lele07g2037 07 13622866 13627718 hybridization
Lele06g1825 06 12809103 12815620 Lele07g2037 07 13622866 13627718 hybridization