Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1994 ATGGTAGGATTTCGTGGATTTTTCATCATGGTGAGAAAGAAGAGAACTGAAGGTCCTAGTGGAGGTGAAAGCTCTGAGACTCGTGAAAGTGGGGGAAGTGGAAGAGGAGGTTATCAGCGCCCTCAAGAAAGGAGTGCTCAAGGCCCTCAACAGTCTGCTGGAGGACCCCAAGGAGGTAGAGGCTGGTATCCTCAAGGAGGGCGTGGCGGTTATGGGGGACGTGGTCGTGGTTCAACCCAACAGCAGTACAGTGGCCCCCCTGATTATCAAGGCAGGGGGAGGGGAGTATCTTCTCAACAGGGAGGTCGTGGTGGATTTCGTGGTGGTCGGGATGGTGCGGGTATAAGTGGACGTGTTGGAGGACCATCATATGGTGTCCCATCCCGACCAGAAGTTCCCGAGCTGCACCAAGCAACCTCAGCTTCATATCAAGCTGGGGTGACTCCTCAGTCTCCGATGCCTGAGGCAAGTTCTGTTTCACAACTTTCTGAGATGACACATGTGGAACAGCAAACTAAGCAGTTAACCATTCATCCAGAAGTTTCTTCTGCCCCCCCAGCCTCAAGTAAATCAGTGAGGTTTCCCCTTCGGCCTGGAAAGGGTAGCTATGGCACAAAGTGTATAGTCAAAGCTAACCACTTCTTTGCTGAGTTACCTAACAAAGATCTTCACCAGTACGATGTAACCATAACTCCAGAAGTGCCATCCAGAGGTGTAAACCGTGCTGTTATGGAGCAGCTGGTTAGGCTTTACCGTGAGTCTCATCTAGGCATGAGATTACCTGCGTATGATGGTCGCAAGAGCCTGTACACTGCTGGTCCTCTTCCTTTTGTTTCAAATGAGTTTAGAATCACTCTCATTGATGAAGAGGATGGAGCAGGAGCAGGAGCAGGAGTTCAAAGGAGAGTAAGGGATTTCAGAGTTGTGATAAAATTAGCTGCCCGAGCTGACCTTCACCACTTAGGGATGTTTTTGCAAGGAAGACAAACAGATGCACCTCAGGAAGCCCTTCAGGTTCTTGACATTGTTCTGCGTGAACTACCCACCACTAGGTATTGTCCTGTGGGAAGATCTTTCTATTCACCTGATATAGGTAGGAGGCAAACATTAGGTGAAGGTTTGGAGAGCTGGCGTGGGTTTTACCAAAGCATTCGTCCAACTCAGATGGGATTGTCGCTCAATATTGATATGTCGTCAACAGCATTTATTGAACCATTGCCAGTAATTGATTTTGTAACTCAGCTGCTGAACAGGGATGTCACCAGCCGCCCATTATCTGATGCTGATCGTGTAAAGATCAAAAAAGCACTTCGTGGTGTCAAAGTTGAAGTAACACACCGTGGAAACATGAGAAGAAAATATCGCATCTCTGGTCTGACATCACAGGCAACTAGAGAGCTGACATTCCCTGTTGATGAGAGGGGGACTGTGAAATCTGTTGTGGAGTACTTTTATGAGACATACGGATTTGTCATTCAACATACTCAGTGGCCTTGCTTACAAGTGGGGAATACAAATAGACCGAACTATTTACCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCAAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTTAGAGTCACCTGTCAGAGGCCTCTTGATAGGGAGCGAGATATCATGCAGACGGTTCATCATAATGCGTACCATCAAGATCCCTATGCTAGAGAGTTTGGAATCAAAATCAGCGAGAAACTTGCACAAGTTGAAGCTCGCATTCTTCCTGCACCTTGGCTGAAGTATCATGATACAGGAAGAGAAAAGGATTGTCTTCCTCAAGTTGGCCAGTGGAATATGATGAATAAGAAAATGGTCAATGGTGGGACTGTTAACCACTGGATCTGCATTAATTTTTCAAGGAATGTTCAAGACACTGTGGCCGGTGGCTTTTGTTATGAACTTTCACAGATGTGTTATATATCTGGCATGGCATTTAATCCAGATCCAGTACTTCCTGTGATCAGTGCCCGCCATGACCAGGTTGATAAGGTTCTGAAATCACGCTATCATGATGCCAAGTCAAAGCTGAAGGACAAGGATCTTGATCTCCTTATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGATCTGAAACGTATTTGTGAGACGGATCTTGGGGTTGTTTCCCAGTGCTGTTTGACAAGACATGTCTTTAAAATGAACAAGCAGTACCTTGCAAATGTTGCTTTAAAAATAAACGTGAAGGTTGGTGGAAGGAACACAGTGCTTGTTGATGCACTTTCAAGACGCATACCTTTGGTTAGCGACCGACCCACTATTATATTTGGAGCTGATGTTACTCATCCACACCCTGGGGAGGATTCTAGTCCATCTATAGCGGCTGTTGTGGCTTCTCAAGATTGGCCTGAAGTCACCAAGTATTCTGGTTTGGTTTGTGCTCAAGCGCACAGGCAGGAGCTCATCCAAGACCTTTTCAAACAGTGGCAAGATCCAGATAGGGGGATAGTAACCGGTGGAATGATCAAGGAGCTTCTCATATCTTTTCGAAGAGCCACGGGGCAGAAGCCACAACGCATCATCTTTTACAGGGATGGTGTGAGTGAGGGGCAATTTTATCAAGTTTTACTTTTTGAGCTTGATGCTATCCGCAAGGCATGTGCATCATTAGAACCTAACTATCAGCCTCCTGTCACTTTTGTGGTGGTTCAAAAGCGCCATCACACGAGGCTGTTTGCTAACAACCATCATGATCGGAATTCGGTGGACCGTAGTGGGAATATATTACCTGGTACTGTTGTAGATTCCAAAATTTGTCATCCAACTGAGTTCGACTTCTATCTTTGTAGTCATGCTGGGATACAGGGTACAAGCCGACCTGCCCATTACCATGTGTTATGGGACGAAAACAATTTTACTGCCGATGCACTTCAGACACTTACTAACAACCTCTGCTACACTTATGCAAGATGCACGAGATCTGTTTCAATTGTGCCTCCTGCATACTACGCACACTTGGCTGCGTTCCGAGCTCGATTTTATATGGAACCTGCTACATCGGATAGTGAGTCAATGAGTGCTGCTGCCGGACGTGGAGCGGGCGGCGGACCAGGACGTAGCACTCGTGCACCTGGTGCAATAGCTGCTGTCAGGCCTCTTCCTGCTCTTAAAGATAATGTGAAGAGGGTCATGTTTTATTGTTAA 3201 0.463 MVGFRGFFIMVRKKRTEGPSGGESSETRESGGSGRGGYQRPQERSAQGPQQSAGGPQGGRGWYPQGGRGGYGGRGRGSTQQQYSGPPDYQGRGRGVSSQQGGRGGFRGGRDGAGISGRVGGPSYGVPSRPEVPELHQATSASYQAGVTPQSPMPEASSVSQLSEMTHVEQQTKQLTIHPEVSSAPPASSKSVRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVPSRGVNRAVMEQLVRLYRESHLGMRLPAYDGRKSLYTAGPLPFVSNEFRITLIDEEDGAGAGAGVQRRVRDFRVVIKLAARADLHHLGMFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDIGRRQTLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTVKSVVEYFYETYGFVIQHTQWPCLQVGNTNRPNYLPMEVCKIVEGQRYSKRLNERQITALLRVTCQRPLDRERDIMQTVHHNAYHQDPYAREFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWICINFSRNVQDTVAGGFCYELSQMCYISGMAFNPDPVLPVISARHDQVDKVLKSRYHDAKSKLKDKDLDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTRHVFKMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYSGLVCAQAHRQELIQDLFKQWQDPDRGIVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPATSDSESMSAAAGRGAGGGPGRSTRAPGAIAAVRPLPALKDNVKRVMFYC 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1994 1066 SMART Piwi_a_2 694 1015 IPR003165 GO:0003676
Lele07g1994 1066 Pfam Argonaute linker 2 domain 546 592 IPR032472 -
Lele07g1994 1066 SUPERFAMILY PAZ domain 208 557 IPR036085 GO:0005515
Lele07g1994 1066 Pfam Argonaute linker 1 domain 354 404 IPR014811 -
Lele07g1994 1066 ProSiteProfiles Piwi domain profile. 694 1015 IPR003165 GO:0003676
Lele07g1994 1066 FunFam protein argonaute 10-like 763 1066 - -
Lele07g1994 1066 Gene3D paz domain 399 524 - -
Lele07g1994 1066 Pfam Glycine-rich region of argonaut 85 184 IPR024357 -
Lele07g1994 1066 Pfam Mid domain of argonaute 603 678 IPR032473 -
Lele07g1994 1066 SUPERFAMILY Ribonuclease H-like 680 1016 IPR012337 -
Lele07g1994 1066 MobiDBLite consensus disorder prediction 1 196 - -
Lele07g1994 1066 CDD PAZ_argonaute_like 405 519 - -
Lele07g1994 1066 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 183 1016 - -
Lele07g1994 1066 Pfam Piwi domain 695 1014 IPR003165 GO:0003676
Lele07g1994 1066 ProSiteProfiles PAZ domain profile. 406 520 IPR003100 GO:0005515
Lele07g1994 1066 FunFam Argonaute 10 584 757 - -
Lele07g1994 1066 Pfam N-terminal domain of argonaute 206 344 IPR032474 -
Lele07g1994 1066 Gene3D - 763 1066 IPR036397 GO:0003676
Lele07g1994 1066 Pfam PAZ domain 410 535 IPR003100 GO:0005515
Lele07g1994 1066 Gene3D - 584 757 - -
Lele07g1994 1066 SMART DUF1785_2 353 405 IPR014811 -
Lele07g1994 1066 CDD Piwi_ago-like 564 1014 IPR045246 -
Lele07g1994 1066 MobiDBLite consensus disorder prediction 75 97 - -
Lele07g1994 1066 MobiDBLite consensus disorder prediction 135 189 - -
Lele07g1994 1066 FunFam Protein argonaute-2 399 525 - -
Lele07g1994 1066 SMART PAZ_2_a_3 410 542 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1994 Lele-ChrLele07 13162708 13169117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1994 129 1066 Eukaryotic Initiation Factors Gene Family AT1G48410 81.481 0.0 1593