Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1992 ATGTTGGCAGAAAAAAATTCCGAAGATTTGATTCTACCAATTGTACGAGAGCTAAAAGCAGCTTCCTGCTGCAGGTGTTGTTTCTACGTCTCTGCCGGAGGCCACCAGTTTTCCCACAATGCTTTCTCTAACGTTGAGTTCCTCTATACTTCTAGGGTGCTAGAGAGCCTTACATCTACAACAACAAGAGAAAAAGAGGAGGCAGCAGACAAAGACAACATGGCCAGGGTCGGGTTACCACCGGGTTTTCGGTTCCATCCGACCGATGAAGAGCTTGTCAATTACTATCTCAAGAGGAAGATCAATGGCGAAGAAATTGAACTTGACATCATTCCGGAGATTGATCTCTACAAATGTGAACCTTGGGAACTTGCAGATAAGTCATTTCTGCCAAGTAGAGATCCAGAGTGGTACTTCTTTGGACCCAGAGACAGGAAATACCCTAATGGTTTCAGAACTAACAGAGCAACAAGAGCTGGGTACTGGAAGTCCACTGGCAAGGACAGAAGGGTCACTTCCCAAAACAGACCCATTGGCATGAAGAAAACTCTTGTTTACTACAGAGGCAGAGCCCCTCAAGGCATCAGAACTGACTGGGTCATGCACGAGTATCGCCTCGACGATAAAGATTCCGAGGACACCTCCGGAATACAGGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATCTGCTCTGAAATTGAAGAGCAGGGGCAGAGTAGTTTAACACTAATTGAGAGCTCGCAAACCCTAAATATTAACAATAATGAAAGTGAAACCATGTCTCCAGAGCCAGCTGGGGCATGTTCTTCATGCTTGGAGGAAGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGATGATGCATGGTATCCTTCTAATGCAGCCATGGCAGGTTGTGAAGAAGTTTCTCATTTTACATTCACAAACTGA 942 0.4469 MLAEKNSEDLILPIVRELKAASCCRCCFYVSAGGHQFSHNAFSNVEFLYTSRVLESLTSTTTREKEEAADKDNMARVGLPPGFRFHPTDEELVNYYLKRKINGEEIELDIIPEIDLYKCEPWELADKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTSQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDSEDTSGIQDTYALCRVFKKNGICSEIEEQGQSSLTLIESSQTLNINNNESETMSPEPAGACSSCLEEEDKDDSWMQFITDDAWYPSNAAMAGCEEVSHFTFTN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1992 313 Gene3D NAC domain 88 232 IPR036093 GO:0003677|GO:0006355
Lele07g1992 313 Pfam No apical meristem (NAM) protein 80 206 IPR003441 GO:0003677|GO:0006355
Lele07g1992 313 FunFam Nac domain-containing protein 86 88 232 - -
Lele07g1992 313 ProSiteProfiles NAC domain profile. 79 229 IPR003441 GO:0003677|GO:0006355
Lele07g1992 313 SUPERFAMILY NAC domain 74 229 IPR036093 GO:0003677|GO:0006355
Lele07g1992 313 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 78 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1992 Lele-ChrLele07 13133655 13141743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1992 74 302 NAC Transcription Factor Family AT3G17730 76.763 4.72e-130 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele07g1992 NAM 2.2e-39 No_clan