Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1989 ATGGTGGGGACCACATTAGTAAACATTGCGGACATTGAAATTTTAGTTGATCTGGCTACGAGGATCGCTCTCTATAAAGCTTGGGTGCTTTCTCCGGCAAGATTGACTCGGATTGGCTTCAATAGAGATGCAGGTATTGAAGCAAACAGTTCAAATCGGCTCAATTCTTTTGTTCTTTTTTGCATTTCCTGGGCAGTTAATCAAATAGAGAGCACAATTTCGAACAACTGTGGCATAGCCAGTAACCGCCATCCAGATGGCAGCACAAAATCTGAAAATTTTGTTTGCAGGAAGGATATAACTACTACCGGAGACAATTTTACTCCCAAGGCAAGGAAACCATATACCATTACTAAACAAAGGGAAAAGTGGACGGAGGAAGAGCATCTGAAGTTCCTTGAAGCTTTGAAATTGTATGGCCGTGGTTGGCGTCAAATTGAAGAACATGTAGGTACCAAAACTGCAGTTCAGATTCGAAGCCATGCACAGAAGTTCTTCTCTAAGGTTGCGCGGGAATCTGAGGGCAACACTGAAAGTTCTATAAAGCCATTTGACATACCTCCTCCTCGGCCAAAAAGGAAACCGTTGCATCCATATCCTCGCAAATCAGCTGACTCGTTCAAAGGACACTCAAATGAATCAGAAAAATCTCCATCTCCAAAGCTGTCAGCTACAGTGAAAGACACCCAATCTCCAACTTCAGTGTTATCCGCATTTGGTTCAGAAGCATTTGGATCAGTATTTTCTGGACAGACTAATAGATGTCCTTCCCCAAATTCCTGCACTACTGACATCCATTCGGTCAGTTTATCACCAGTTGGAAAAGAAAATGATTGTATTACATCCGATTCATCAGAGGAGGAAGAGAAAGTATATTTAGCTTCAGTCCCATCAATTGCTGATTTGAAGCCAGATCTGTCCCTGAAGGTTGAGTTGACATCCATGAAAAATGAGAATTATACTGAAGATGCTGCTAAAATGGCGCATGTCACAAGCATTAAGCTTTTTGGAAGAACTGTCCCCTTGACAAAGAATCAGAAGTCAGTGAATATAGAAGAGAAAATTCAGTCAGTTATGTGTAAGGAGAATACTTGCTCTGTTGTTGAGTCTGGATTTGACAATTCTTTACCATGCTGGAATTTACGCCTAAGTCTTCCAGATTTAGACCTCGGCAACAAAATTTTAAATCTTGCGCCCCTTCATCCCTCCCTCAAAGAGAGAACGATTGAGAAGGAAATTCATTGTATTGATTCTAACGCTGAATCAGTGAGTGAAATGGAAAATGGAGACAAGTTGGATGCTATAGATTCTCAATGTGAATTAGCCCTCAAATCTCCTCGAGGGTTTGTACCATATAAAAGATGTTTAGCTGAGAGAGACATGAATCATGAGTTTGTTGATGGATTTGAAGAGAGGAAGGGACAACGAACTCGTGTGTGCTAG 1443 0.4123 MVGTTLVNIADIEILVDLATRIALYKAWVLSPARLTRIGFNRDAGIEANSSNRLNSFVLFCISWAVNQIESTISNNCGIASNRHPDGSTKSENFVCRKDITTTGDNFTPKARKPYTITKQREKWTEEEHLKFLEALKLYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKVARESEGNTESSIKPFDIPPPRPKRKPLHPYPRKSADSFKGHSNESEKSPSPKLSATVKDTQSPTSVLSAFGSEAFGSVFSGQTNRCPSPNSCTTDIHSVSLSPVGKENDCITSDSSEEEEKVYLASVPSIADLKPDLSLKVELTSMKNENYTEDAAKMAHVTSIKLFGRTVPLTKNQKSVNIEEKIQSVMCKENTCSVVESGFDNSLPCWNLRLSLPDLDLGNKILNLAPLHPSLKERTIEKEIHCIDSNAESVSEMENGDKLDAIDSQCELALKSPRGFVPYKRCLAERDMNHEFVDGFEERKGQRTRVC 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1989 480 ProSiteProfiles SANT domain profile. 119 170 IPR017884 -
Lele07g1989 480 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 119 168 IPR006447 GO:0003677
Lele07g1989 480 MobiDBLite consensus disorder prediction 187 215 - -
Lele07g1989 480 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 170 IPR017930 -
Lele07g1989 480 FunFam protein REVEILLE 6 isoform X1 123 171 - -
Lele07g1989 480 CDD SANT 123 166 IPR001005 -
Lele07g1989 480 SMART sant 120 168 IPR001005 -
Lele07g1989 480 PANTHER SWI/SNF COMPLEX-RELATED 89 406 - -
Lele07g1989 480 ProSiteProfiles Myb-like domain profile. 116 166 IPR001005 -
Lele07g1989 480 SUPERFAMILY Homeodomain-like 115 170 IPR009057 -
Lele07g1989 480 Gene3D - 123 170 - -
Lele07g1989 480 MobiDBLite consensus disorder prediction 169 229 - -
Lele07g1989 480 Pfam Myb-like DNA-binding domain 121 164 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1989 Lele-ChrLele07 13113552 13120051 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele07g1989 Myb_DNA-binding 1.7e-13 CL0123