Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1984 ATGGGGAAGAGAGAAAGATCGCTTGGAGCAAACCACGAGACATTCTCATACTGTAGCGCTTTCACCTTGCTTGCTTACTTCCCTCCTCCTTCAGAGTTCTCTATCCCTTCAGGAGAATTTCGTCTTCCTTCACCACAGATGGTGGATTTGGAAAAAGATGAGGTGCCAATGCTGTTGGAGACAGAGGAACCATCAGTTGAATTTGTGGATTCTAAATTACGGAGGCTTATATCCAGGACACGAAGTGCATCAATGTCTATTCCCATGAGCTCCATGGAGCCACATGAGAGAGAAGCTAGTCTTGTGGGACATACTGGTCCACTAAGGAGTGAGAGGAAAACCCCCTTTGTGCAGATGAGTGGTCCGCTATATGTCACCAAAGGACATGGAAATCTTTTCCGACAGAACGTCAATGCCACGGGGAACAAAGCAGTGGAGAGCAGGACAGAAAAATTTGCTTTGCATGGAAGAGATGGTAATGATTGGCAGACCAACTATGCCCACAAAAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGTAATGATCCTTATTGTACAACTTGCCCTACTTACTTCAAGACCTCTCAGCAAAGGAATCCTAAGGCTTCTGGTTTGTTTGATCCCAAGTTCCACAATGCTCTCTATGGAGATGCTAAGGGTTGTGCAAGAAGATTTATTTCTTCTCTGTCTTCTTATGTCCCTGGAGTTATGAATCCTCATACTAAAGTTGTACAGCATTGGAACAAGTTTTTCGCCATTTCTTGCTTAGTGGCAATTTTTGTGGATCCATTATTTTTCTTTGTGCTCGGTGTAAACAAGGACGAAAGATGTATTTTCATAAACTGGAAGTTGACAGGAGCACTTGTTTTTGTTAGATCCATGAACGATTTTGTATACTTCCTAAACATGCTTCTTCAGTGTAGGTTGGCTTATGTGGCTCCTGACTCTAGGGTGGTTGGTGCTGGTGATTTAGTTGACCATCCAAAAAAAATTGCTCTCCATTATTTGAAGCGTTATTTTCTTATTGACTTATTTGTTGTATTTCCACTTCCTCAGATAATGATATTGGTTGCCCTACCACATCACTTGGGTTCATCAGGAGCAAATTATGCTAAGAATCTTCTACGTCTAGCCATCCTTGTTCAGTATATTCCCAGATTGTGCAGGTTTCTGCCTCTTCTAATTGGTCAGTCTCCAAGTGGATTCATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTGTGCTATCTGGCCATGTTGTTGGGTCTTGCTGGTATCTCTTTGGTCTACAGAGGGTCAACCAATGTCTTCGAAATGCCTGCCATGGGGAGAAATTTGCTCACTGCATGCAATTGATTGATTGTGGGCAGGGTCATATAGGCACCTATCCGTCTTCTCTTTTGTTCAACGAAAGTCAAAGTTGGTCACATAGTCCTGGTGCAGGAAGTTGTTTCCCAGTCTCAGATGATGATAAAGGTTTTCCTTATGGAATCTATGCTAAAGCTGTTAACCTTGTTACAGAACCTAGTGTGATCACCAGATATGTGTATTCACTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGGAATCAAATCCCAAGCTATTTTGTCTGGGAAGTCCTTTTTACAATGGCCATCATAGGACTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAATATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGTCACTTAGACGTCGTGACGTGGATCAATGGATGAGCCACCGGCGCTTGCCAGAAGATTTAAGAAGGAGAGTAATACTGGCTGAACGATATAATTGGGCTGCAACAAGAGGGGTAAATGAAGAAATACTTCTGGAGAGTTTGCCAGAGGATCTTCAGAGAGACATTAGACGCCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTCGCCCTGATGGATGAACCTATCTTAGATGCCATTTGTGAGAGACTAAGACAAAAAACATACATCAAAGGAAGCAATATTCTGTATCATGGTGGTCTGGTAGACAAAATGGTGTTTGTTGTGCGTGGAAGATTGGAGAGCATTGGAGATGATGGGATCAGGGTTCCCTTAGTTGAAGGAGATGTGTGTGGTGAAGAACTCCTGACATGGTGTCTTGAACATTGTTCCGTGAACAGAGATGGTAAAAAAGTAAGGCTTCCTGGACAAAGATTGCTCAGCACCAGGACTGTACATTGCTTAACAAATGTGGAGGCATTTTCACTCCGATACGCAGACCTCGAAGAAGTCACTAGCCTTTTTACAAGATTCCTAAGAAACGCGCGGGTTCAAGGAGCCATAAGGTATGAATCGCCTTATTGGAGAAGCCTTGCAGCAACTCGCATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTCAGTCGTGCCGATACCTCACAATCAAATCTTTAG 2463 0.4287 MGKRERSLGANHETFSYCSAFTLLAYFPPPSEFSIPSGEFRLPSPQMVDLEKDEVPMLLETEEPSVEFVDSKLRRLISRTRSASMSIPMSSMEPHEREASLVGHTGPLRSERKTPFVQMSGPLYVTKGHGNLFRQNVNATGNKAVESRTEKFALHGRDGNDWQTNYAHKNEHLLRSGQLGMCNDPYCTTCPTYFKTSQQRNPKASGLFDPKFHNALYGDAKGCARRFISSLSSYVPGVMNPHTKVVQHWNKFFAISCLVAIFVDPLFFFVLGVNKDERCIFINWKLTGALVFVRSMNDFVYFLNMLLQCRLAYVAPDSRVVGAGDLVDHPKKIALHYLKRYFLIDLFVVFPLPQIMILVALPHHLGSSGANYAKNLLRLAILVQYIPRLCRFLPLLIGQSPSGFIFESAWANFFINLLTFVLSGHVVGSCWYLFGLQRVNQCLRNACHGEKFAHCMQLIDCGQGHIGTYPSSLLFNESQSWSHSPGAGSCFPVSDDDKGFPYGIYAKAVNLVTEPSVITRYVYSLFWGFQQISTLAGNQIPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVDQWMSHRRLPEDLRRRVILAERYNWAATRGVNEEILLESLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYIKGSNILYHGGLVDKMVFVVRGRLESIGDDGIRVPLVEGDVCGEELLTWCLEHCSVNRDGKKVRLPGQRLLSTRTVHCLTNVEAFSLRYADLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADTSQSNL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1984 820 SMART cnmp_10 651 783 IPR000595 -
Lele07g1984 820 SUPERFAMILY cAMP-binding domain-like 579 775 IPR018490 -
Lele07g1984 820 Pfam Ion transport protein 249 579 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele07g1984 820 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 182 813 - -
Lele07g1984 820 Gene3D Jelly Rolls 649 773 IPR014710 -
Lele07g1984 820 Gene3D - 253 576 - -
Lele07g1984 820 ProSiteProfiles cAMP/cGMP binding motif profile. 651 719 IPR000595 -
Lele07g1984 820 SUPERFAMILY Voltage-gated potassium channels 241 580 - -
Lele07g1984 820 CDD CAP_ED 651 767 IPR000595 -
Lele07g1984 820 Gene3D Helix hairpin bin 579 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1984 Lele-ChrLele07 13040349 13050937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1984 51 729 Ion Channels AT3G17700 62.958 0.0 840