Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1976 ATGTCGATCGCATCCACAGTCAGAAAACCAGAAGCCCGAGAACACTTGAACTGCACTTTTGCCTCCAGATATGTGCGCAACTCAGTTCCCAAGTTTGAGATGCCGGAGAATTCCATACCCAAGGATGCAGCGTATCAGATTATAAACGACGAGTTGATGCTGGACGGAGCACCCAGGCTCAACTTGGCTTCCTTCGTCACCACTTGGATGGAGCCTGAGGTTGACAAGCTAATCATGGCCTCACTTAACAAGAACTACGTTGACATGGACGAGTACCCTGTTACCACTGAGCTCCAGCTCATCTGTTCCGTGCCCCCTATTGGAGAAGATGAGGCTGCAGTGGGGGTAGGAACTGTGGGTTCATCAGAAGCAATCATGCTTGCAGGTCTTGCTTTTAAAAGAAAATGGCAGATGAAGAGAAAATCAGAAGGAAAACCATATGATAAACCCAACATAGTTACCGGAGCTAATGTTCAGGTTTGTTGGGAGAAATTTGCGAGGTACTTTGAGGTGGAGCTGAAGGAGGTGAAGCTAAGTGAGGGATGTTATGTGATGGACCCAAAGAAAGCAGTGGAATTGGTGGATGAGAACACCATATGTGTTGCAGCAATATTGGGGTCAACTCTGACCGGAGAATTTGAGGATGTGAAGCTGTTGAATGAGCTTCTTACGGAGAAGAACATGGAGACAGGATGGGACACTCCAATTCATGTAGATGCTGCAAGTGGAGGGTTTATTGCTCCGTTCTTGTTCCCCGATCTCGAGTGGGATTTTCGGTTGCCTTTGGTGAAGAGTATTAATGTTAGTGGTCATAAGTATGGTCTTGTGTATCCTGGTGTTGGTTGGGTTGTCTGGAGGAGTAAGGATGACTTACCTGATGATCTTGTCTTCCATATCAACTATCTTGGCACTGATCAGCCCACTTTCACACTCAATTTCTCCAAAGGCTCTAGTCAAATAATTGCTCAATATTATCAGTTCATTCGGCTCGGCTTCGAGGGTTACAAAAACATCATGGAGAACTGCATGGAGAGTGCAAGAGTATTGAAGGAAGGAATAGAGAGAACAGGCCGGTTCAACATTCTGTCAAAGGACGTAGGAGTGCCACTGGTAGCCATATCTTTAAAAGACAGCAGCCAGCACACAGTGTTTGAGATATCAGACCATCTGAGGAAGTTTGGGTGGATTGTTCCGGCCTATTCAATGCCACCAGACGTGCAGCACGTGGCGGTGCTGCGTGTGGTCATCCGGGAGGACTTCAGCAGGAGCCTGGCAGAGAGACTCGTGTCCGACATTGAAAAGGTTGTTAAGCTCTTGGACACGCTTCCTAGCCCTCTGACCATTAAAGCTGCTCATGTCAGTGCCATAGCTAATGAGAGCGATCATCACGAGGTTAAGAAGAGTGAAATGGAGATTCAAGCAGAGGTTGTAGCATTGTGGAAGAGTCTTGTGGAAGGCAAGAGAACTGGAGCCTGCTAA 1479 0.4719 MSIASTVRKPEAREHLNCTFASRYVRNSVPKFEMPENSIPKDAAYQIINDELMLDGAPRLNLASFVTTWMEPEVDKLIMASLNKNYVDMDEYPVTTELQLICSVPPIGEDEAAVGVGTVGSSEAIMLAGLAFKRKWQMKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGCYVMDPKKAVELVDENTICVAAILGSTLTGEFEDVKLLNELLTEKNMETGWDTPIHVDAASGGFIAPFLFPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPDDLVFHINYLGTDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMESARVLKEGIERTGRFNILSKDVGVPLVAISLKDSSQHTVFEISDHLRKFGWIVPAYSMPPDVQHVAVLRVVIREDFSRSLAERLVSDIEKVVKLLDTLPSPLTIKAAHVSAIANESDHHEVKKSEMEIQAEVVALWKSLVEGKRTGAC 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1976 492 Pfam Pyridoxal-dependent decarboxylase conserved domain 35 376 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele07g1976 492 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 439 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele07g1976 492 FunFam Glutamate decarboxylase 356 443 - -
Lele07g1976 492 PANTHER GLUTAMATE DECARBOXYLASE 2 492 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele07g1976 492 FunFam Glutamate decarboxylase 68 355 - -
Lele07g1976 492 Gene3D - 1 67 - -
Lele07g1976 492 FunFam Glutamate decarboxylase 7 67 - -
Lele07g1976 492 Gene3D - 356 443 - -
Lele07g1976 492 SUPERFAMILY PLP-dependent transferases 14 438 IPR015424 -
Lele07g1976 492 Gene3D - 68 355 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1976 Lele-ChrLele07 12968677 12972049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1976 11 492 Calmodulin-binding Proteins AT3G17760 75.203 0.0 765