Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1972 ATGTGCAGTAGAGGCCATTGGAGGCCAGCCGAGGATGAGAAACTTCGAGAATTGGTGGAGCGCTATGGACCTCATAACTGGAACGCCATAGCTGAAAAGCTTCGAGGAAGATCAGGGAAGAGCTGCAGGTTGAGGTGGTTCAATCAACTGGACCCAAGAATAAACAGGAGTCCATTCACAGAGGAAGAAGAAGAGAGGCTTGTGGCATGTCACAGAATGCATGGAAACAGATGGGCAGTGATAGCGAGGCATTTTCCAGGAAGAACTGATAATGCTGTCAAGAATCACTGGCACGTTATGATGGCTCGGATTCGCCGTGAAAGCTCCAAGTTGTCTTCCAAACGCCCTCTTCCTCATCATCAACAGTGTTCTCCACCGCCAATATCATCAGATCCTACTGCTAATAGTAGCGTTGTTCCTTCTTTCGTTGAGAAATACTACGACAAGCATGCCTTCCCTGCTTATTGTCTTCCTTATAACCCCTTCGTCCTTCAATTCCCCAACAAGTTTCTTCATCTTCAACTTCCAACTCGCTCTTCATCAGTACTTCATGATAAAAGTCAATCAGTTGAGTTCTACGACTTTCTTCAAGTGAACACAGATTCTAATAATAGAAGCGAGGTGACAGACAATGCCAAAAGAGAAGACGAGGAAGTGAATCAAGATAGTGAACAACATAATAATGTGGGAGAACGAGGACGACAGAACAAAGACGGCGGCAGCGGCGGTGTTCCCTTTATCGATTTTTTGTCTGTTAATGGAAGCTCCTAA 771 0.454 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLVACHRMHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRESSKLSSKRPLPHHQQCSPPPISSDPTANSSVVPSFVEKYYDKHAFPAYCLPYNPFVLQFPNKFLHLQLPTRSSSVLHDKSQSVEFYDFLQVNTDSNNRSEVTDNAKREDEEVNQDSEQHNNVGERGRQNKDGGSGGVPFIDFLSVNGSS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1972 256 Gene3D - 57 122 - -
Lele07g1972 256 MobiDBLite consensus disorder prediction 203 246 - -
Lele07g1972 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Lele07g1972 256 MobiDBLite consensus disorder prediction 108 135 - -
Lele07g1972 256 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Lele07g1972 256 MobiDBLite consensus disorder prediction 207 233 - -
Lele07g1972 256 Pfam Myb-like DNA-binding domain 56 99 IPR001005 -
Lele07g1972 256 Pfam Myb-like DNA-binding domain 4 50 IPR001005 -
Lele07g1972 256 CDD SANT 7 48 IPR001005 -
Lele07g1972 256 CDD SANT 58 101 IPR001005 -
Lele07g1972 256 PANTHER MYB PROTEIN-RELATED 4 165 - -
Lele07g1972 256 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Lele07g1972 256 FunFam MYB transcription factor 4 55 - -
Lele07g1972 256 Gene3D - 4 55 - -
Lele07g1972 256 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Lele07g1972 256 SMART sant 3 52 IPR001005 -
Lele07g1972 256 SMART sant 55 103 IPR001005 -
Lele07g1972 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1972 Lele-ChrLele07 12934398 12936110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1972 1 256 MYB Transcription Factor Family AT1G17950 51.852 1.87e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g1972 Myb_DNA-binding 1.3e-15 CL0123