Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1953 ATGCCTCAGAATAATAAGATTTGCAAAGAGCCGAATCTGATGCCTGATCTTTCTCTTCACATAAGCCTTCCGAACAGTGCTCCTTCTTCAATTTGCACTGGAAATAATAATAACGAAGAAGCAGATTCGTCGTTTGATATTTGGAGAAGCAGCAACACAGAAGAAGTAGATGGCGTAGTCATCAAATCCTACAGTGAGAGTTCAATCAGAGGTAGCCCTCATCATCAAGAACAAAAAACCCATAATCTCTCTCTCTTCAATCCTCATCATCTTCCCACAAGCACTACTGGTTCTGAGGCTGAGAGCCCCTGGAGGAGGACGACGGCGACAACCACAAACGTCGCAGGTCAAGATGGTGGGTTTTGGGTTTCAGAGGGACTCAATTCAAGACTCACCAGAGGAATCCCACTTCAGGATTCTAACAATATTTCTGTATACCCACTTCATCAACAATTTCCCTATACTAATAATTACTCAGCTTCTTCTTATCATCCTAGTTTTAGGCCCTGTGATAATAATAACAACAGTGCTCTCGGCGGAGGTGGTGCTAATTATAATCCAATCTCGAGGTTTAATGGGATAAGCATGGAGAGTTTGATAAGACCCCATCAACCCAATCATCATCATCATCAGTTTTCCTACTTGAATCATAATCAGTTTGGTTCAAACCCTGATTTCTCAAACGGATTTGGGAGGTTTTCGTCCAAGATGATGTTGCCTAATAGGATTCACAGTAATAAGAGGAACATGAGGGCTCCCAGAATGCGTTGGACCAGCTCTCTTCATGCTCGTTTTGTTCACGCCGTTGAGCTCCTTGGCGGACATGAAAGAGCAACTCCTAAGTCAGTTTTGGAGCTCATGGATGAGAAAGATCTAACACTTGCTCATGTGAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCCTCAGATGGAGATGAAGATTCCATGAACCTAACACCTCCACCACTAAATGAAAATGAGTACTATTTTTCACCCAACAAGAGATGCCCTACAAATGCATCATCTTTAGATCAGGATATGGCCTACACTAGCACCAGTTTGTGGGCTAATTCTTCTAGTAGACAAGCATGGAAACAAGCTAGTTCCACAGACTTAGATGGAATTAGACCACCTGATAATTTATCTTCTTCTTATCAGCACATTACTGAGAAACACTCCGAGGGAAATAATAATTTTTTGCAATCAAGAAGCTTAAAGGACTCTGAGAATTTATGCTTGGAGTTCACCCTAGGCAGATCAACGTGGGAAAGCAACGAAGAACATGCCAGTTAA 1317 0.4214 MPQNNKICKEPNLMPDLSLHISLPNSAPSSICTGNNNNEEADSSFDIWRSSNTEEVDGVVIKSYSESSIRGSPHHQEQKTHNLSLFNPHHLPTSTTGSEAESPWRRTTATTTNVAGQDGGFWVSEGLNSRLTRGIPLQDSNNISVYPLHQQFPYTNNYSASSYHPSFRPCDNNNNSALGGGGANYNPISRFNGISMESLIRPHQPNHHHHQFSYLNHNQFGSNPDFSNGFGRFSSKMMLPNRIHSNKRNMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDEKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDSMNLTPPPLNENEYYFSPNKRCPTNASSLDQDMAYTSTSLWANSSSRQAWKQASSTDLDGIRPPDNLSSSYQHITEKHSEGNNNFLQSRSLKDSENLCLEFTLGRSTWESNEEHAS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1953 438 MobiDBLite consensus disorder prediction 320 334 - -
Lele07g1953 438 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 253 306 IPR006447 GO:0003677
Lele07g1953 438 MobiDBLite consensus disorder prediction 310 334 - -
Lele07g1953 438 MobiDBLite consensus disorder prediction 67 106 - -
Lele07g1953 438 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 14 434 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele07g1953 438 SUPERFAMILY Homeodomain-like 250 307 IPR009057 -
Lele07g1953 438 MobiDBLite consensus disorder prediction 78 106 - -
Lele07g1953 438 FunFam Myb family transcription factor 251 309 - -
Lele07g1953 438 Gene3D - 252 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1953 Lele-ChrLele07 12738737 12745526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1953 247 430 G2-like Transcription Factor Family AT5G16560 56.545 3.09e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele07g1953 None None None