Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1926 ATGCAATGGCACGACATGTCAGGCACAAGTAAAAGCAGCTTAGAGAACTTACTGGACTTGGACAAAACGAGTTACAAAAAGCATTGTGAAGCAACTGAGACCCCAGAGGCAAACAGAGGTGAAATCATGGCTATCGTCGGACCAAGTGGGGCCGGAAAATCAACATTCCTCGATGCCTTGGCTGGTCGGATTGCACAAGGGAGTCTTGAAGGAGAGGTTAGGCTTCCTCCTACACTCTCCGGGGAGGAAAAAGAGAAGAGAGTCCATGAGCACCTTGATCAGCTTGGCTTGCAGAATCTAAGCCCAGCAACTTATCTCACAAACCTATCTGAAACTCACAACAATACTTCGAATTTTGCAGACACGTACATTGGTGATGAAGGGACAAGAGGAGTGTCCGGAGGGGAAAGAAGAAGAGTATCCATTGGCATAGATATCATTCATAAGCCAGCACTTCTGTTTCTTGACGAACCGACCTCAAGTCTCGATTCTACAAGTGCTTACAATGTAGTGGAAAAGATTAAACACATAGCTCAAGGTCAAGGTGAGTGGCTAATGAATTCAAGTGGTGGTACAGGGGAAGACTGTTATACATGGGAAGGCCAAATGCATTCTTATCTTTCTGGTTTTGGAAGAACAATACAAGATGGAGAAAATACTATTGAGTACATGTTAGATGTTATTAAAGAATATGATGAATCGACAATTGGTTTGGACCAGCTTGTTCAGTACCAATGCTATAGCCAGAAGCCTGATCAAGCAGCCATGACACCAATCCCTAAAACACCAAAGACTCCAAGACACAGAAGTAGAACCCCTGCATCTAAATATATCATCAACTTGTTGTCACAAGGATTCACTCCTGGAACATCAAAGCCTGACTCCAACCAAGTTGATGATGATGATGAGAGTTTCGATTACTCGCTTGAGAGGAAAAGTGCTCAGGCCCCAAGGAATGTGGACAGTGCTGGTGTCCCACGTTTGGCTTCTCAGTTCTACCAAGAGTTCTCAGCCAAGGATTTTTCTGTCTGGCTTTACCATGGTGACCCTCCTCGAGCCAAGATCCCCAATGTAGTTAGCCAATATATGGACTTATATGGACCTTCTTATGAAGAGTTTGAGATTGAAGGAGCTCTTGATGAACCACATCTAGGATCAAAATATGCAAATCCATGTCTGCGTGAGGTTGCAGTGCTGTCATGGAGAACTGCACTCAATGTGATTCGAACACCAGAACTCTTCCTGTCCCGTGAGAAAGGTTCATCTTCATCAGAGAGACATCCCACAATGCTTACCGCGCTTCTTCATACGTCATTTCTTCCCTCATTGTCTATCTCCCATTTTTCGCCGTCCAAGGCTTCACATTTGCCACCATAG 1377 0.4459 MQWHDMSGTSKSSLENLLDLDKTSYKKHCEATETPEANRGEIMAIVGPSGAGKSTFLDALAGRIAQGSLEGEVRLPPTLSGEEKEKRVHEHLDQLGLQNLSPATYLTNLSETHNNTSNFADTYIGDEGTRGVSGGERRRVSIGIDIIHKPALLFLDEPTSSLDSTSAYNVVEKIKHIAQGQGEWLMNSSGGTGEDCYTWEGQMHSYLSGFGRTIQDGENTIEYMLDVIKEYDESTIGLDQLVQYQCYSQKPDQAAMTPIPKTPKTPRHRSRTPASKYIINLLSQGFTPGTSKPDSNQVDDDDESFDYSLERKSAQAPRNVDSAGVPRLASQFYQEFSAKDFSVWLYHGDPPRAKIPNVVSQYMDLYGPSYEEFEIEGALDEPHLGSKYANPCLREVAVLSWRTALNVIRTPELFLSREKGSSSSERHPTMLTALLHTSFLPSLSISHFSPSKASHLPP 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1926 458 Pfam ABC transporter 38 160 IPR003439 GO:0005524
Lele07g1926 458 Gene3D - 75 186 IPR027417 -
Lele07g1926 458 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 233 IPR003439 GO:0005524
Lele07g1926 458 SMART AAA_5 39 220 IPR003593 -
Lele07g1926 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 180 IPR027417 -
Lele07g1926 458 Gene3D - 34 74 IPR027417 -
Lele07g1926 458 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 74 - -
Lele07g1926 458 MobiDBLite consensus disorder prediction 252 272 - -
Lele07g1926 458 ProSitePatterns ABC transporters family signature. 132 146 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1926 Lele-ChrLele07 12499744 12502505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1926 40 181 Calmodulin-binding Proteins AT2G36910 28.161 1.56e-08 55.5