Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1893 ATGAGAAGGCCTTGCTCTCAGAAGCCAGACTCCTTTCAGAAACGACCATGGTCCAAGGAAGAAGACCAGAAACTCATTGATTACATCCAAAAACATGGTGAAGGTTGCTGGCCTTCTCTTCCTCAGGCTGCAGGGTTGCGTCGCTGCGGAAAAAGCTGTAGGTTGAGATGGTTAAATTATCTGAAGCCAGACATTAAACGAGGAGACATCGGAGAAGACGAAGAGGACTTGATCATCAGGCTTCATGCTCTTCTTGGCAACCGGTGGGCACTGATAGCGGGAAGATTACCAGGAAGAACTGATAACGAGGTGAAGAATTACTGGAACTCACACATAAGAAAGAAGCTTATTCAGATGGGTCCTCATAATGTTGGTGATCGCTTTAAAGGCTCCACACTTTTTAATGGAACTGCAAAATCATCCATCATTAACGAGCCTAATCACAAGAATCCTGTCAAGTTGCATGCTGCTACTGATAATAATATTCTCGACGAAGACGACGACCTTCAGGTATTTGAGTCAACAAGAAGCAAGCCCAAGTTCAACCTCAACGACTTTCCAGAGTTGAATCTTGATCTCAAACTCACTATTAATTGA 597 0.4389 MRRPCSQKPDSFQKRPWSKEEDQKLIDYIQKHGEGCWPSLPQAAGLRRCGKSCRLRWLNYLKPDIKRGDIGEDEEDLIIRLHALLGNRWALIAGRLPGRTDNEVKNYWNSHIRKKLIQMGPHNVGDRFKGSTLFNGTAKSSIINEPNHKNPVKLHAATDNNILDEDDDLQVFESTRSKPKFNLNDFPELNLDLKLTIN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1893 198 FunFam MYB-related transcription factor 13 66 - -
Lele07g1893 198 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele07g1893 198 Gene3D - 71 130 - -
Lele07g1893 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 61 IPR017930 -
Lele07g1893 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele07g1893 198 SMART sant 13 63 IPR001005 -
Lele07g1893 198 SMART sant 66 114 IPR001005 -
Lele07g1893 198 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 153 - -
Lele07g1893 198 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele07g1893 198 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele07g1893 198 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele07g1893 198 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Lele07g1893 198 CDD SANT 16 61 IPR001005 -
Lele07g1893 198 CDD SANT 72 112 IPR001005 -
Lele07g1893 198 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1893 Lele-ChrLele07 12199051 12202003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1893 2 197 MYB Transcription Factor Family AT4G38620 45.370 1.05e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g1893 Myb_DNA-binding 6.5e-15 CL0123