Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1886 ATGAATTTTTTTAACATGGTGGCATTTAATATGTGGTTAAATTGTGAAGATCCCCTGATCAATCATATCCCATGGACCTGTGAGGAGGACAAGTTACTGTTGCACATAATCCAAGAGATTGGCAATAGGAACTGGTTTAAAATTGCCGCATCACTAAACACAAATAGGTCCCCATTTCAATGCTTGGCACGATACCAGAGGGGTTTAAATCCTTCCATGCTAAATAGCGAATGGACTGAGGAAGAAGATGCTCAACTTCGTTCTGCTGTTGCAATTTTTGGTGTGAGCAATTGGCAGTCCGTAGCTTCTGTTTTAGAGCGGAGGACTGGAACTCAATGCTCTAATAGATGGAAGAAGTCCCTCTGTCCTGATAGGAAAGGGAGCTTTACTGTAGAAGAAGATGAGCGCTTGATAGTGGCTGTCCATCTCTTTGGACGGAAATTGAATCAGATAGCTAGATTTGTTCCGAGCCGGACTCAAGCTCAGTGTAGAGACAGGTACGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTGAGGAAGAAGATTCGAGATTGAAAAAAGCAATTGCCAAATATGGATTCTGCTGGTCAAAGGTTGCTGCCGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATTTCCTGACCAAGTTCCTATGCTTCAAGCAGCTAGAAAGATGAAAAAATCTGCTCTGATCAGTAACTTTGTTGATTGTGAGTCTGAACGGCCTTGCCTTTCTTTAAACGATTTTCTTCCTTTGGCACTGTTAGATCCACCATCTGATCCAGATGCTGTGAACCTCCCTCAGAAGCGGAAGAGTATGTCAAGCAATGCTTCTGAGAAAAAGAGGCCCCAAAAACTCACAAAAAAGGCTCAAAGTTGTCTCAAGAAAGCACAGGCTGACGAGGTTGAGCCTTGTAGTGGACACGGTGCCAACAAGCCAAAGATTACTGAACCACATTTGGAGGACAACTCTGTTGAAGCTGTGCATGATCACTCCCCGCTGGACTTGGTTGTGACAACAACGAATGGCCAAGGGGATTTAGCTGTAGGTAGCAAGGTTGCCAGAAATACTACTTCAAAGAAGGAAAGAAAGAAGAAAGGGGAACACAACAAAATGGTTAGAAGTGTTCAAACAACAGAGGACCACCTGTTTAAGAATAAAATGTCAAAACCTGGAAGCCTATCTTCTATGCAGATTTTAGAAAGTCAGGATGAAAATATAACTCTTGCTAGATTTGTACGCAATGGATCGAACAAACGTTTTAAAAATATGGATCAAATGACTCAAGCTGCTTCCTATGCTAGCTGGTCCATGAAAAAATCACGTAGATCTGGTCGAGCTGCCAAACAAACTCATGATTACCTGCCTTTCAGTTTGAAAAAGGGACATGAATTGCTTTCTGAAGAAGTACACAACGGTCATGACCACAACCAAGAAACGTTGGTCATGCAAGACAAGTTAAATAAAGATTGTATTGATGTTACACCTGGGACTCTGGTGGTCCAGAATCATTCTCTCAATTTGAAGAACATATCAATCAGTGAAGCTGATGACAATGGGAAGGCAATGTCGGGGCCAGTTGATGAGCAGATTATGTTTTTGGATAGTGTGACAGAACCCAAAAACATCAATGTTGGAGAAGATGTGCCTACTGACGTTCCCTTTGCTTCATTCCTGAAAAAGAAGAAACGCAAGGGGAAGCCAATGGCAGAACCAGTTGATGAGCAGGCTATAGTTTCGAATGGTTTGAAAGCATGA 1788 0.4273 MNFFNMVAFNMWLNCEDPLINHIPWTCEEDKLLLHIIQEIGNRNWFKIAASLNTNRSPFQCLARYQRGLNPSMLNSEWTEEEDAQLRSAVAIFGVSNWQSVASVLERRTGTQCSNRWKKSLCPDRKGSFTVEEDERLIVAVHLFGRKLNQIARFVPSRTQAQCRDRYVNSLDPSLKWGGWTEEEDSRLKKAIAKYGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMKKSALISNFVDCESERPCLSLNDFLPLALLDPPSDPDAVNLPQKRKSMSSNASEKKRPQKLTKKAQSCLKKAQADEVEPCSGHGANKPKITEPHLEDNSVEAVHDHSPLDLVVTTTNGQGDLAVGSKVARNTTSKKERKKKGEHNKMVRSVQTTEDHLFKNKMSKPGSLSSMQILESQDENITLARFVRNGSNKRFKNMDQMTQAASYASWSMKKSRRSGRAAKQTHDYLPFSLKKGHELLSEEVHNGHDHNQETLVMQDKLNKDCIDVTPGTLVVQNHSLNLKNISISEADDNGKAMSGPVDEQIMFLDSVTEPKNINVGEDVPTDVPFASFLKKKKRKGKPMAEPVDEQAIVSNGLKA 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1886 595 Pfam Myb-like DNA-binding domain 25 86 - -
Lele07g1886 595 SUPERFAMILY Homeodomain-like 73 167 IPR009057 -
Lele07g1886 595 CDD SANT 24 67 IPR001005 -
Lele07g1886 595 SMART sant 125 173 IPR001005 -
Lele07g1886 595 SMART sant 21 71 IPR001005 -
Lele07g1886 595 SMART sant 74 123 IPR001005 -
Lele07g1886 595 SMART sant 176 224 IPR001005 -
Lele07g1886 595 Gene3D - 177 224 - -
Lele07g1886 595 Gene3D - 126 176 - -
Lele07g1886 595 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 125 IPR017930 -
Lele07g1886 595 SUPERFAMILY Homeodomain-like 151 225 IPR009057 -
Lele07g1886 595 CDD SANT 180 222 IPR001005 -
Lele07g1886 595 CDD SANT 128 171 IPR001005 -
Lele07g1886 595 ProSiteProfiles Myb-like domain profile. 125 171 IPR001005 -
Lele07g1886 595 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Lele07g1886 595 CDD SANT 77 121 IPR001005 -
Lele07g1886 595 ProSiteProfiles Myb-like domain profile. 172 222 IPR001005 -
Lele07g1886 595 MobiDBLite consensus disorder prediction 363 382 - -
Lele07g1886 595 MobiDBLite consensus disorder prediction 574 595 - -
Lele07g1886 595 MobiDBLite consensus disorder prediction 270 327 - -
Lele07g1886 595 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Lele07g1886 595 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 172 226 IPR017930 -
Lele07g1886 595 ProSiteProfiles Myb-like domain profile. 70 121 IPR001005 -
Lele07g1886 595 Pfam Myb-like DNA-binding domain 179 221 IPR001005 -
Lele07g1886 595 Pfam Myb-like DNA-binding domain 126 169 IPR001005 -
Lele07g1886 595 Gene3D - 23 73 - -
Lele07g1886 595 Gene3D - 76 125 - -
Lele07g1886 595 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 67 IPR017930 -
Lele07g1886 595 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 166 IPR017930 -
Lele07g1886 595 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 11 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1886 Lele-ChrLele07 12140579 12143715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1886 12 303 MYB-Related Transcription Factor Family AT3G18100 54.266 9.05e-105 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g1886 Myb_DNA-bind_6 2.9e-15 CL0123