Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1883 ATGGATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCAGCAGATTTAACAGAAGACAATAATGATGTTGTTAATCCGGAGGATGCAAAGCCTGAAGAAGTTGAGACTTCCGCTAAGATGGAGGAAGGTAAGGAAATTCCTTCAGTGGAAGATCAAGGGGATGTGACGACAGATAGGAAAAGACACTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACAACTGGAGGCCAGATTCTTTTCCTAAGTGGCCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGCAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAGAGGGTAAAGGGCAAAACGGTTGAAGTTGGAAGAGCGCATTTTGAGACAGAAAAAACAAGGTTTACAATTTTGGATGCACCTGGTCATAAAAGCTATGTCCCCAACATGATCAGTGGTGCGGCTCAAGCTGATATTGGAGTTTTGGTAATTTCTGCTCGAAAGGGAGAATTCGAAACTGGGTATGAGAGAGGTGGACAAACCCGTGAACATGTCCAGCTTGCAAAGACATTGGGTGTGTCTAAGCTAGTTGTTGTTATTAATAAAATGGACGAACCTACAGTAAAGTGGTCAAAAGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAAGTCATCGGGCTACAATGTGAAGAAAGATGTACTGTTTTTGCCAATGTCTGGGCTGACTGGTGCCAACATCAAAACAAGAGTGGATAAAAGCACTTGTCCTTGGTGGGATGGTCCCTGCCTATTTGAAGTCCTTGATGGTGTTGAAATTCCACCTCGTGACCCCAAAGGCCCTTTCAGGATGCCCATAATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTAGAATCTGGTACTGTCCATGGAGGGGATTCCTTGTTGGTTATGCCAAATAAGGATCATGTAAAAGTTGTTGCTGTGTTGATTGATGAAGATAGGGTCAAACGTGCTGGACCTGGTGAGAATTTACGGGTTAGAATATCTGGTGTTGAAGAAGAAGACATATTAGGCGGGTTTGTTCTGTCTAGTGTTGAAAATCCAATACCAGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTTTGCATATCCACAGTGTTGTTGAAGAATGTGAGATTGTTGAGCTCGTACAGCAAATTGATCCAAAGACAAAGAAACCTATGAAAAAGAAGCCTCTCTTTGTGAAGAATAATGCTGTTGTTGTCTGCCGAGTTCAGGTTAATAATTCGATATGCATTGAGAAATTCTCTGATTTCCCCCAACTTGGGAGGTTCACTCTTCGCACTGAAGGAAAAACTGTTGCAGTGGGAAAAGTAACTGGTTTTTAA 1464 0.4139 MDIEEDIRSLQLDSADLTEDNNDVVNPEDAKPEEVETSAKMEEGKEIPSVEDQGDVTTDRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKTRFTILDAPGHKSYVPNMISGAAQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLVVVINKMDEPTVKWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPMSGLTGANIKTRVDKSTCPWWDGPCLFEVLDGVEIPPRDPKGPFRMPIIDKFKDMGTVVMGKVESGTVHGGDSLLVMPNKDHVKVVAVLIDEDRVKRAGPGENLRVRISGVEEEDILGGFVLSSVENPIPAVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELVQQIDPKTKKPMKKKPLFVKNNAVVVCRVQVNNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1883 487 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 117 132 IPR031157 -
Lele07g1883 487 PRINTS GTP-binding elongation factor signature 160 171 IPR000795 GO:0003924|GO:0005525
Lele07g1883 487 PRINTS GTP-binding elongation factor signature 204 213 IPR000795 GO:0003924|GO:0005525
Lele07g1883 487 PRINTS GTP-binding elongation factor signature 144 154 IPR000795 GO:0003924|GO:0005525
Lele07g1883 487 PRINTS GTP-binding elongation factor signature 65 78 IPR000795 GO:0003924|GO:0005525
Lele07g1883 487 PRINTS Yeast eukaryotic release factor signature 202 209 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele07g1883 487 PRINTS Yeast eukaryotic release factor signature 429 438 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele07g1883 487 PRINTS Yeast eukaryotic release factor signature 167 174 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele07g1883 487 PRINTS Yeast eukaryotic release factor signature 288 299 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele07g1883 487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 296 IPR027417 -
Lele07g1883 487 Gene3D Translation factors 380 487 - -
Lele07g1883 487 CDD eRF3_II 292 373 - -
Lele07g1883 487 Pfam Elongation factor Tu C-terminal domain 378 485 IPR004160 -
Lele07g1883 487 MobiDBLite consensus disorder prediction 1 56 - -
Lele07g1883 487 Pfam Elongation factor Tu GTP binding domain 61 264 IPR000795 GO:0003924|GO:0005525
Lele07g1883 487 Gene3D - 45 284 IPR027417 -
Lele07g1883 487 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 61 290 IPR000795 GO:0003924|GO:0005525
Lele07g1883 487 CDD EF1_alpha 65 286 - -
Lele07g1883 487 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 40 285 - -
Lele07g1883 487 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 289 375 - -
Lele07g1883 487 Gene3D Translation factors 290 375 - -
Lele07g1883 487 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 381 486 IPR009001 -
Lele07g1883 487 MobiDBLite consensus disorder prediction 24 56 - -
Lele07g1883 487 CDD eRF3_C_III 379 485 - -
Lele07g1883 487 PANTHER TRANSLATION FACTOR 53 485 - -
Lele07g1883 487 FunFam Putative translation elongation/initiation factor family protein 379 487 - -
Lele07g1883 487 SUPERFAMILY Translation proteins 284 377 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1883 Lele-ChrLele07 12095525 12104586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1883 55 485 Eukaryotic Initiation Factors Gene Family AT5G10630 36.697 4.18e-95 300