Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1874 ATGAGCGAAAGCTCGCAGTCTCAGTCTGCCAGTGGAAATGGGAGCGTAAATGTGGAGCCTCAGGACCCAATATCAAACCCTAATAACAAGCGGGAGGCTTATTCAGAAACTGATGATCTGACAGTAAAGAAATCCAGAACTGAAGCTTCGACTTTGCCTGATGCTTCTGGCAGTGAAGAAGAAGGGAACTCAGGAGCTGTTTCAGGGCAAAAGAATGCCAAGGAACTGAAAGAAGGGAACTCAGGAGCTGTTTCAGGTCAACAGAATGCCAAGGAACTAACTTTCGAGATTGAGGCGGTCGCAGCTGAGGATAAGGGGTCTAGGCATACAATGGAAGATGCCTGGGTAGTGCTTTTGGACGCCAGTTTAGATCACCCCGGAAACCTGAGATGTGCACACTTTGCAATCTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTTTCAACAGGATTACCACGTGAGTTGTTAGATGTAAAGGTAGCTAAAAGAGCAATACTTGAAGGTTTTCGCAAAACCGATGAGTCCCTTCTTCAAGAAAGTGTTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTGTTGCAAATATAGGAGATGCCAAAGCAGTTTTAGCTCGATCAGCTATAACTGATGGATCCCAAAATCAATCAGATGGAGTCCATGCATTGAAGGCCATTGTTTTGACGAGGGAACACAAGGCAATCTACCCACAGGAGCGGGCTCGTATTCAGAAGGTTGGTGGTGTTGTGAGCTCCAATGGACGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGACCGCCAGTTTAAGAAGGTGGGTGTTACTGCAACCCCAGATATCCATTCTTTTGACCTTACTGATAGAGAGCATTTTATCATCCTTGGCTGTGATGGCCTATGGGGGGTATTTGGTCCCAGTGATGCAGTTGATTTTGTTCAGAAACTATTGAGCGAGGGGTTGCCTGTCACAACCGTGGCCCGCCATCTCGTAAGAGAAGCTGTTCGTGAGCGGCGCTGTAAGGATAATTGCACTGTAATTGTTATTGTATTCAAGCGTAAGTAG 1128 0.4637 MSESSQSQSASGNGSVNVEPQDPISNPNNKREAYSETDDLTVKKSRTEASTLPDASGSEEEGNSGAVSGQKNAKELKEGNSGAVSGQQNAKELTFEIEAVAAEDKGSRHTMEDAWVVLLDASLDHPGNLRCAHFAIYDGHGGRLAAEYAQKHLHENVLSTGLPRELLDVKVAKRAILEGFRKTDESLLQESVAGGWQDGATAVCVWVLGQKVFVANIGDAKAVLARSAITDGSQNQSDGVHALKAIVLTREHKAIYPQERARIQKVGGVVSSNGRLQGRLEVSRAFGDRQFKKVGVTATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVDFVQKLLSEGLPVTTVARHLVREAVRERRCKDNCTVIVIVFKRK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1874 375 Gene3D - 78 375 IPR036457 -
Lele07g1874 375 ProSiteProfiles PPM-type phosphatase domain profile. 98 372 IPR001932 -
Lele07g1874 375 SUPERFAMILY PP2C-like 97 373 IPR036457 -
Lele07g1874 375 MobiDBLite consensus disorder prediction 1 87 - -
Lele07g1874 375 MobiDBLite consensus disorder prediction 46 70 - -
Lele07g1874 375 CDD PP2Cc 102 372 IPR001932 -
Lele07g1874 375 Pfam Protein phosphatase 2C 103 360 IPR001932 -
Lele07g1874 375 PANTHER PROTEIN PHOSPHATASE 2C 73 370 IPR015655 GO:0004722|GO:0006470
Lele07g1874 375 FunFam Probable protein phosphatase 2C 67 86 374 - -
Lele07g1874 375 MobiDBLite consensus disorder prediction 1 31 - -
Lele07g1874 375 SMART PP2C_4 94 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1874 Lele-ChrLele07 12036273 12041108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1874 24 324 PP2C-type Phosphatase Gene Family AT1G18030 67.550 1.95e-140 400