Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1865 ATGGGCAACGGCATCAACATCGGCGGAAGTGTCAGTGGCCGTAGCAAGAAGAAGAACAATTTCTCGGCGGCTGCAACCTTCAGAGGGCTCGGATGCACCGCGGGTGCGTCCCAGGAGGTGTCGGTTCCGGCGGTCATTAGGTCATCGGCGGACTGGCAAGGGAAGAAGGCTAGAAAGAAGAAGCACAAAAGAAATAGCACCAAGACCTGTCCTGGGGTTCTTGATGGTTCTGGTTCTGCTAATTGCGTTGATTTTCTAGACGTCTGGTGTGGTCCTGGAATTGGGTTTTCAGCCGATGCTGCTGCGTCTGTTGATTGCGTCGTGGCGAGGAAGAATGTTTCTGCGAGAGGAAAGATTGATGTGGAGAGGATGATTCACAGGGAGCGTGTTTCTTATCTTGGAAGACGAACAGTTAACCCAGAAACCATCTCGTTTCTGGATAATGACCCTGATATCTTCCCTACACGCCCTCCTGCTCCTGATTCCTATGCAACTTCAAGATACTATCGTCATGTTCAACATCCTTCATCTGAAGGTTTTGCTGAGATAATGATGCTTCAAGGAGGTCTGCTAATGGGAGGGATATTAGATTCACATGACCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCCTATGAGCAACTGCTTGAGCTTGAAGAGAAGATAGGTTATGTGAACACTGGTCTTAAAGAAGACGAGATAGGATGCCACATAAGGAAAATCCAATATCCATTTTTGAGTGAATCATTGAAGCACCATATTAACAAAAACTGCAGCATTTGTCAGGAGGAATATGAAGGAGATGATGAGGTGGGGAAGCTTAAATGTGAACACAGCTATCACTTTGAATGCATCAGACAATGGCTTGCACAGAAAAACTTCTGCCCAGTCTGTAAGCAAGAAGTTGTGGTTCGTCACTAG 927 0.4628 MGNGINIGGSVSGRSKKKNNFSAAATFRGLGCTAGASQEVSVPAVIRSSADWQGKKARKKKHKRNSTKTCPGVLDGSGSANCVDFLDVWCGPGIGFSADAAASVDCVVARKNVSARGKIDVERMIHRERVSYLGRRTVNPETISFLDNDPDIFPTRPPAPDSYATSRYYRHVQHPSSEGFAEIMMLQGGLLMGGILDSHDQFRDWRLDVDNMSYEQLLELEEKIGYVNTGLKEDEIGCHIRKIQYPFLSESLKHHINKNCSICQEEYEGDDEVGKLKCEHSYHFECIRQWLAQKNFCPVCKQEVVVRH 308
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1865 308 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 132 304 IPR045191 GO:0061630
Lele07g1865 308 FunFam E3 ubiquitin-protein ligase rnf12-A 227 306 - -
Lele07g1865 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 306 IPR013083 -
Lele07g1865 308 ProSiteProfiles Zinc finger RING-type profile. 260 301 IPR001841 -
Lele07g1865 308 SMART ring_2 260 300 IPR001841 -
Lele07g1865 308 Pfam Ring finger domain 259 301 IPR001841 -
Lele07g1865 308 SUPERFAMILY RING/U-box 259 306 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele07g1865 Lele-ChrLele07 11931123 11935157 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1865 15 215 C3H Transcription Factor Family AT1G73760 44.843 2.33e-50 166