Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1843 ATGAATTGCTTTCGGAGAAACTATAGTCAGATTGTCAACCTGAATCCTTGCTATGTGCTGCATTACAATCCCTCGAATGAAGTGATGATGCGACAAGAGAATAGAACAAGTCTCCAATATGTTTTATTAACCATAATATTTGCATTTTTTGATTTGGAAAATACGAATCAGGAGCTGAAAAGTGATTTGAAAGATCTATACATAAATTCAGCAGTTCAGATTGATGTAGCTGGGAACCGTAAGGCTGTGGTTATTCATGTTCCTTATAGATTAAGGAAGGCTTTTAGGAAGATTCATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGGAAGGATGTAGTGTTGATTGCCACCCGGCGGATATTGAGGCCTCCAAAGAAGGGTTCTGCTGCACAACGTCCTAGAAGCCGCACACTTACTGCTGTGCATGAAGCAATGCTGGAGGATGTTGTATTGCCTGCCGAGATTGTTGGGAAGCGCGTTAGGTATAGAGTTGATGGGTCCAAGATTATGAAGGTTTTCTTGGACCCCAAGGAGCGAAACAACACTGAGTACAAGCTTGAGACTTTTGCTGCGGTATACAGGAAGCTTTCGGGCAAAGATGTTGTCTTTGAGTATCCTATCACGGAGGCTTAG 642 0.4237 MNCFRRNYSQIVNLNPCYVLHYNPSNEVMMRQENRTSLQYVLLTIIFAFFDLENTNQELKSDLKDLYINSAVQIDVAGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVLIATRRILRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPITEA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1843 213 ProSitePatterns Ribosomal protein S7e signature. 101 114 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele07g1843 213 Pfam Ribosomal protein S7e 34 208 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele07g1843 213 PANTHER 40S RIBOSOMAL PROTEIN S7 44 212 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1843 Lele-ChrLele07 11753271 11755550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1843 48 213 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 84.337 3.17e-106 302