Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1842 ATGTCTACTTCAAAGAGCTGCGAGAGCAGTTGCAGTGAAGATGATAATGAACTCAGGAGAGGACCTTGGACTCTTGAAGAAGATACTCTTTTAACTCAGTACATCTCTGCTCATGGGGAAGGACGATGGAATTTGCTGGCAAAACGTTCAGGGTTGAAGAGAACAGGGAAGAGTTGCAGATTAAGATGGCTTAATTATCTGAACCCCCAAGTAAAGCGAGGAAATTTATCCCCAGAAGAGCAGATTTTGATCCTTGAACTCCACTCAAAGTGGGGCAACATGTGGTCGAAGATTGCACAACATCTTCCTGGGAGGACAGACAATGAAATCAAGAACTACTGGAGAACTCGGATTCAGAAACAAGCAAGACACTTGAATATTGACACAAACAGCGCAGAGTTTAAAGAAATCGTCAGGCGATTTTGGATGCCAAGATTGCTGCAGAAAGCAAGAGAAACAGCTTCCCCTCTTCCTCCTCATCCTCCTGCCATGTCATCAATCCAAAACCAAACGATTCCTAATTTGCCTACTGACAGTGTTTCTCTGCGTTCACAAAAAGTGACAGTAGTACCAACAACAACACAGATTCCTTGGCAGGGACCTAATTGTGTGATGATGAATGAAACAGTAGTTCAAAACCGTTCATGCGTGTCCTCTGCTTCTTCATCGGAATCATCGAACATCCCAGAAGTGTCTCAGTTTCAGGCCTTAGATAACAGTGACATGAGCTCCTTTATGTATGATATTGGCTACTATGTTAATAACAATACCTACGACATGGAAACATTCAATCTGGGAACAACAGTGACAGATGAGGCGATGGCAGGAAACTGGATGAACATGAACAGTGATGATGTTGCATGCAGCATGTGGGGCATGGATGAACTGTGGCAATTCAGAAACTTGCAAGAATAA 915 0.4328 MSTSKSCESSCSEDDNELRRGPWTLEEDTLLTQYISAHGEGRWNLLAKRSGLKRTGKSCRLRWLNYLNPQVKRGNLSPEEQILILELHSKWGNMWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLNIDTNSAEFKEIVRRFWMPRLLQKARETASPLPPHPPAMSSIQNQTIPNLPTDSVSLRSQKVTVVPTTTQIPWQGPNCVMMNETVVQNRSCVSSASSSESSNIPEVSQFQALDNSDMSSFMYDIGYYVNNNTYDMETFNLGTTVTDEAMAGNWMNMNSDDVACSMWGMDELWQFRNLQE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1842 304 Gene3D - 75 140 - -
Lele07g1842 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 71 IPR017930 -
Lele07g1842 304 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Lele07g1842 304 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Lele07g1842 304 CDD SANT 77 116 IPR001005 -
Lele07g1842 304 CDD SANT 22 67 IPR001005 -
Lele07g1842 304 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Lele07g1842 304 SMART sant 19 69 IPR001005 -
Lele07g1842 304 SMART sant 72 120 IPR001005 -
Lele07g1842 304 Gene3D - 20 72 - -
Lele07g1842 304 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 222 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele07g1842 304 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Lele07g1842 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 122 IPR017930 -
Lele07g1842 304 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Lele07g1842 304 FunFam Myb transcription factor 20 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1842 Lele-ChrLele07 11750055 11751172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1842 15 300 MYB Transcription Factor Family AT1G68320 45.704 1.91e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g1842 Myb_DNA-binding 2e-15 CL0123