Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1834 ATGGAGGAAAACAATAATCTACCTCCTGGATTCAGATTCCATCCAACAGATGAAGAGCTCATAAACTATTATCTAACAAGTAAAGTTTCTGATGCTAGTGGCTTCACTTGCAAAGCTATAGCAGTGGTTGATCTCAACAAGTCTGAACCTTGGGACCTTCCGGCTAAGGCTTCCATGGGAGACAAGGAAGGATGGGTTGTTTGCAGGGTGTTCCAAAAGAGCATATCAACAGGGAAAAAACCCCAGGAGATGACTTCATCGTCGCAAGTATCTTTAGATTCACCATGCGATGCAACCAGTTCAATGGTGAATGAACTTGCTAATTTTACTAGTCTTGCGAATTCCTCAACAGGATTCACAAACAACGTTAATAATAATGGCCATCACATGAGTAATATAAACACAAACATGAACTTGAGCAGCAATTGGTCATCATTATCATCAGCTGCAACAGAGCAAGTTCCGTCGTCTCTTGTTCCATGGCCTGCATCAGCTTCTCGAGGGTTAATGCTTAATCCCAATCAGCTGTCAGTGAACTCCTTGCTTCTCAAAGCATTGCAGCTCAAGAACATTAATGATCACTTTGTTGCATCATCGTACATGTCTCAAGCAGCAGTTTCCAACAACCTTGGAGGAACTCATGATCATGTCAGTGCTTCTCATCAGCCGGATCAACCGTTCAATCTGGACTCGGTTTGGTGA 702 0.4288 MEENNNLPPGFRFHPTDEELINYYLTSKVSDASGFTCKAIAVVDLNKSEPWDLPAKASMGDKEGWVVCRVFQKSISTGKKPQEMTSSSQVSLDSPCDATSSMVNELANFTSLANSSTGFTNNVNNNGHHMSNINTNMNLSSNWSSLSSAATEQVPSSLVPWPASASRGLMLNPNQLSVNSLLLKALQLKNINDHFVASSYMSQAAVSNNLGGTHDHVSASHQPDQPFNLDSVW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1834 233 Pfam No apical meristem (NAM) protein 8 83 IPR003441 GO:0003677|GO:0006355
Lele07g1834 233 MobiDBLite consensus disorder prediction 214 233 - -
Lele07g1834 233 ProSiteProfiles NAC domain profile. 7 161 IPR003441 GO:0003677|GO:0006355
Lele07g1834 233 SUPERFAMILY NAC domain 4 73 IPR036093 GO:0003677|GO:0006355
Lele07g1834 233 Gene3D NAC domain 16 89 IPR036093 GO:0003677|GO:0006355
Lele07g1834 233 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1834 Lele-ChrLele07 11680384 11681827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1834 1 87 NAC Transcription Factor Family AT3G18400 60.920 1.68e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele07g1834 NAM 3.9e-15 No_clan